Helicobacter pylori oki112: HPOKI112_05765
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Entry
HPOKI112_05765 CDS
T03723
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hpyc
Helicobacter pylori oki112
Brite
KEGG Orthology (KO) [BR:
hpyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpyc03016
]
HPOKI112_05765
Enzymes [BR:
hpyc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HPOKI112_05765
Transfer RNA biogenesis [BR:
hpyc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPOKI112_05765
Prokaryotic type
HPOKI112_05765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AHN36526
LinkDB
All DBs
Position
1172811..1173539
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AA seq
242 aa
AA seq
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MRCFKATIAYDGAYFLGYAKQPNKLGVQDKIEGALNMLGIKSAVIAAGRTDKGVHANNQT
LSFHAPKHWSADKLFYYLAPKLAPHIVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
APYIACGDYGSLDLLNTALKQFTGKHDFSLFKKEGGATTNPNRIIFNAFAYTAFIMGHEC
VVFKIIGDAFLRSSVRLIIQTCVQYSLEKITLAEIEMQIHNLKATIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttaaggctactatcgcttatgatggggcgtattttttaggctatgccaaa
cagcctaacaaactcggcgttcaggataaaatagagggcgctttaaacatgctaggaatt
aaaagcgcagtcatagcagccgggcgcacggataaaggcgtgcatgcgaacaaccaaacg
ctgtcttttcacgctccaaaacactggagcgctgataaattattttattatctagccccc
aaactcgccccgcatattgtcttaaaaaaactagaagaaaaaaacttccatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttgacgaagaatttaaaaacgcctttttta
gcgccctatatcgcttgtggggattatggctcactagatttattaaataccgctttaaag
caattcacaggcaagcatgatttttctttgtttaaaaaagaaggcggggctacaaccaat
cctaatcgcatcatttttaacgcttttgcttatacagcctttatcatggggcatgagtgc
gtggtgtttaaaatcattggcgatgcgtttttacgctccagcgtgcgtttgatcattcaa
acatgcgttcaatattccttagaaaaaatcacgctcgctgaaattgaaatgcaaatccac
aacctcaaagccactataagaacacccataatggctaatggtttgtatttgcacagggtg
tattattga
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