Helicobacter pylori oki112: HPOKI112_07390
Help
Entry
HPOKI112_07390 CDS
T03723
Name
(GenBank) RNA pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
hpyc
Helicobacter pylori oki112
Brite
KEGG Orthology (KO) [BR:
hpyc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hpyc03009
]
HPOKI112_07390
Enzymes [BR:
hpyc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
HPOKI112_07390
Ribosome biogenesis [BR:
hpyc03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
HPOKI112_07390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AHN36818
LinkDB
All DBs
Position
complement(1473862..1474650)
Genome browser
AA seq
262 aa
AA seq
DB search
MEGFSLRINQFLAHYTKHSRREAEKLVLEGRVKINHEHAKLVSVVKENDKVFLDKRLIKP
LKNKKFSVLVYHKPKGELVSKNDPLKRRVIYESLEKKYAHFAPVGRLDFASEGVLLLSDS
KAVVSALMHANLEKEYLIKIQGFVTREMENAMQEGLKLENATKGAHQKTPIKSMEFSPFI
GYEIIKNHAKYSKLRVIINEGKNRELRRFFAFFNAGVLDLRRVRYGFVNLNALPVGKMRF
LNRQEYNELHAFMANAANTKGD
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
gtggagggatttagcttgaggatcaaccaatttttagcccattacaccaagcattccaga
agagaggctgaaaaattggttttagaggggcgggtgaaaatcaaccatgagcatgccaaa
ctcgttagcgtggttaaagaaaacgacaaggtgtttttagacaaacgactcatcaagccc
ttaaaaaacaaaaaattcagcgtgctggtctatcacaagccaaagggcgaattggtgagt
aaaaacgatcccttaaaacggcgcgtgatttatgaaagcttggagaaaaaatacgcccat
tttgcgccggtggggcgtttggattttgcgagtgaaggggtgctattattaagcgatagt
aaggcggtggtgagcgctttaatgcatgcgaatttagaaaaagagtatctcattaaaatt
caaggctttgttacaagagagatggaaaacgcgatgcaagagggcttgaaattagaaaac
gctactaagggagcgcaccaaaaaacccccattaaaagcatggaattttccccctttatt
ggttatgaaatcatcaaaaaccatgccaaatactccaaacttagagtcattatcaatgag
gggaaaaacagagaactaaggcgtttttttgcgttttttaacgctggagtgttggattta
aggcgcgttcgttatggttttgtgaatttgaatgccttgccggtagggaaaatgcgtttt
ctaaaccgccaagaatacaacgaactgcatgcgtttatggctaatgcggctaatactaaa
ggggattag
DBGET
integrated database retrieval system
