Helicobacter pylori oki112: HPOKI112_08060
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Entry
HPOKI112_08060 CDS
T03723
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hpyc
Helicobacter pylori oki112
Pathway
hpyc00550
Peptidoglycan biosynthesis
hpyc01100
Metabolic pathways
hpyc01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hpyc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPOKI112_08060
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HPOKI112_08060
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpyc01011
]
HPOKI112_08060
Enzymes [BR:
hpyc01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HPOKI112_08060
Peptidoglycan biosynthesis and degradation proteins [BR:
hpyc01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HPOKI112_08060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AHN36937
LinkDB
All DBs
Position
complement(1618422..1620188)
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AA seq
588 aa
AA seq
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MKNLRYKLLLFVFIGFWGLLALNLFILSVKNQEYYEKLAERNMTKKEFLVPTRGDITDRN
DEFLATNELVFGVFLPSRLKQKELLEKIEIIQTFFPNFSKEMLLNNYQKENSLYNHNLIR
VVGFIPYIAMQPLYTKLIQTQGIFVHPLDKRYYPNNALASHVLGYVGVASLQDLKDDEEN
QYSQIVGKTGIEKEYNKLLQGKVGYKIMRVNALNQELATLEVVPPSTNNHLQLSLDKRLQ
KEADKLFENKRGAILVMDAENGELLVAGSYPEYNLNDFVGGISQDKWQKLQDDIYNPLLN
RFANALYPPGSVVKMGVGLSFLENLHITENTTIPTPPFIEVGKRKFRDWKKTGHGNSNLY
KAIRESVDVYFYKFGLEISIEKLSKTLREVGFGEKTGVDLPNEFVGIVPDNLWKLKRFNQ
DWRVGDTLITAIGQGSFLATPLQVLAYTGLIATGKLATPHFAINNKQPLKDPLNSFQKKK
LQALRVGMYEVCNHKDGTAYHSTRGSKVTLACKTGTAQVVEIAQNIVNRMKEKDMEYFHR
SHAWITAFLPYEKPKYAITILVEHGEGGSKLGGLLVKMSNKLYELGYL
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcttcgttataagcttttgctctttgtttttatagggttttgggggttacta
gccttaaatttatttattttaagcgttaaaaatcaagaatactatgaaaaactggccgaa
cgaaacatgactaaaaaagaatttctagtccctacaaggggcgatattacagacagaaat
gatgagtttttagccactaacgaattggtgtttggcgtgtttttgcccagcagattgaaa
caaaaagaacttttagaaaaaattgaaataatccaaacatttttccctaacttttccaaa
gaaatgcttttaaacaattaccaaaaagaaaattcgctttacaaccataacctcattaga
gtggtgggattcattccttatatcgccatgcaacctctttataccaaactcatccaaact
caaggcatttttgtgcaccctttagacaagcgctactatcctaataacgctttagcttcg
catgttttaggctatgtgggggtggcaagcttgcaagatctaaaagacgatgaagagaat
caatacagccagattgtgggcaaaaccggcattgaaaaagaatacaacaagcttttacaa
ggcaaggtgggctataaaatcatgcgcgtcaatgcactcaatcaagaattagccacctta
gaagtagtaccaccaagcaccaacaaccacttgcaattgagtttagacaaacgcttgcaa
aaagaagcggacaagctctttgaaaataaaaggggggcgattttagtgatggatgcagaa
aatggggaattgctcgttgcaggaagttaccctgaatacaatttgaacgattttgtaggc
gggatcagtcaagacaaatggcaaaaacttcaagatgatatttataaccccttattaaac
cgcttcgctaacgctttgtacccgccgggatctgtggttaaaatgggcgtggggttaagc
tttttagaaaatcttcatatcacagaaaacaccactatccccacaccgccttttattgaa
gtgggcaagcgcaaattcagagattggaaaaaaacagggcatggcaattccaatttgtat
aaagccattagggagtccgtggatgtgtatttttataagtttgggcttgaaatctctata
gaaaaactctctaaaactttaagggaagtgggctttggggaaaaaacgggcgttgatttg
ccgaatgaatttgtggggattgtgccggataatttgtggaaactcaaacgcttcaatcaa
gattggcgcgttggggacacgctcattaccgctattgggcaaggctcttttttagccacg
cccttgcaggttttagcctacacgggactcattgctacgggcaaactggcaacgcctcat
tttgctatcaacaacaaacaaccgctcaaagatcccttaaacagttttcaaaaaaagaag
ctccaagccttgagagtgggcatgtatgaagtgtgtaaccataaagacggcaccgcttat
cattccacaaggggttctaaggttactttagcgtgtaaaaccggcaccgcgcaagttgtg
gaaatcgctcaaaacatcgtcaaccgcatgaaagaaaaggatatggaatatttccatcga
tcccatgcgtggattacggcattcttgccttatgaaaaacccaaatacgctatcactatt
ttagtagagcatggggaaggggggtcaaaactagggggcttgttagtgaaaatgagcaac
aaactctatgaacttggctatctttaa
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