Helicobacter pylori oki128: HPOKI128_00085
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Entry
HPOKI128_00085 CDS
T03724
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hpyd
Helicobacter pylori oki128
Brite
KEGG Orthology (KO) [BR:
hpyd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpyd01011
]
HPOKI128_00085
Enzymes [BR:
hpyd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HPOKI128_00085
Peptidoglycan biosynthesis and degradation proteins [BR:
hpyd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HPOKI128_00085
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
HTH_Mga
SLT_2
DUF928
Phage_lysozyme2
Motif
Other DBs
NCBI-ProteinID:
AHN37014
LinkDB
All DBs
Position
11720..12844
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AA seq
374 aa
AA seq
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MPKRMKCFSQKWLVFFVTHWLLLASLGHAKMAFESNIDTKALEAFGVNASFLSQMPNALK
KMNKEEEWKKLVKRFDVNYQFIPIIKNMLIEASVPQEFLFLAMAESKFSSRAYSRKKAVG
IWQFMPSTAKELGLKVNHYIDERRDTVKSTQAAITYLKRLYKQTGEWYLVAMAYNYGLRK
VQNAIKAAGTSDIKILLDEDKKYLPKETREYIRSILSLALKFNSLDNLKDKEYLLNRGAR
VSLVGVPFKRHTSLIQVAKNLNLSLETLKSYNHQFRYNILPSKDPTYTIYIPYEKLALFK
QRQLKQNKNIQASPKSPFITHVVLPKETLSSIAKRYQVSISSIQLANNLKDSNIFIRQRL
IIPTNKKLLATREF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagaatgaagtgttttagtcaaaaatggttggttttttttgttacccattgg
cttttattggcttctttaggccatgcgaaaatggcttttgaatccaatattgacaccaaa
gcgttagaggcttttggggttaatgcgagctttttatcccaaatgccaaacgctctaaaa
aagatgaataaagaagaagaatggaaaaagttagtcaaaagatttgatgtgaattaccag
ttcatccccatcattaaaaacatgctgatagaagcgagcgtgccgcaagaatttttattt
ttagccatggcagagtctaaattttcatcaagggcttatagcaggaaaaaagcggtaggg
atttggcaattcatgccaagcacggctaaagaattagggcttaaagtcaaccattacatt
gatgaaagaagagataccgttaaaagcactcaagcggcgatcacttacttgaaacggctc
tacaagcaaaccggggagtggtatttggtcgctatggcgtataattacggcttacgcaag
gttcaaaacgctattaaagccgccggcacttcggacattaagattttgttagatgaagat
aaaaaatacctccctaaagaaacacgagagtatatccgctccattctaagcttagcgtta
aaattcaacagcctagacaatctcaaagataaagaatacctgctcaatcgtggggcgagg
gtgagtttagtgggcgtcccgtttaaaaggcacacttctttaatccaagtggctaaaaat
ttaaacttgagtttagaaaccttaaaatcttacaaccaccaattccgctataacattctg
ccttctaaagaccccacctacaccatttatatcccttatgaaaaactcgctcttttcaaa
caacgccagctcaaacaaaataaaaacattcaagccagtccaaaaagcccttttatcacc
catgtggtcttgcctaaagaaaccttatcttctatcgctaaacgctatcaagtcagcatt
tccagcatccaattagccaataacctcaaagattctaatatttttatccgccagcgctta
atcatccccaccaacaaaaaattactcgctacaagggaattttaa
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