Helicobacter pylori oki128: HPOKI128_00120
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Entry
HPOKI128_00120 CDS
T03724
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
hpyd
Helicobacter pylori oki128
Pathway
hpyd00550
Peptidoglycan biosynthesis
hpyd01100
Metabolic pathways
hpyd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
hpyd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
HPOKI128_00120
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
HPOKI128_00120
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpyd01011
]
HPOKI128_00120
Enzymes [BR:
hpyd01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
HPOKI128_00120
Peptidoglycan biosynthesis and degradation proteins [BR:
hpyd01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
HPOKI128_00120
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PBP_dimer_2
Motif
Other DBs
NCBI-ProteinID:
AHN37021
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Position
16467..18242
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AA seq
591 aa
AA seq
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MKNLRYKLLLFVFIGFWGLLVLNLFILSVKNQEYYEKLAERNMTKKEFLIPTRGNITDRN
HEFLATNELVFGVFLPSGLKQKELLEKIEIIQKFFPNFSKEALLNNYQKENSLYNHNLIK
VVGFIPYTTMQSLYAKLIQTQGIFALPLDKRYYPNNALASHVLGYVGVASLQDLKDDEEN
QYSQIVGKTGVEKEYNKLLQGKVGYKIMRVNALNQELATLEVVPPSANNHLQLSLDKRLQ
KEADKLFENKRGAILVMDAENGELLVAGSYPEYNLNDFVGGISQDKWQKLQDDIYNPLLN
RFANALYPPGSVVKMGVGLSFLENLNITENTTIPTPPFIEVGKRKFRDWKKTGHGNSNLY
KAIRESVDVYFYKFGLEISIEKLSKTLREVGFGEKTGVDLPNEFVGIVPDNLWKFKRFNQ
DWRVGDTLITAIGQGSFLATPLQVLAYTGLIATGKLATPHFAINNKQPLKDPLNSFQKKK
LQALRVGMYEVCNHKDGTAYHSTRGSKVTLACKTGTAQVVEIAQNIINRMKEKDMEYFHR
SHAWITAFLPYEKPKYAITILVEHGEGGSKLGGLLVKMSNKLYELGYLNQL
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatcttcgttataagcttttgctctttgtttttatagggttttgggggttattg
gttttaaatttatttattttaagcgttaaaaatcaagaatactatgaaaaactggctgaa
cgaaacatgactaaaaaggaatttctaatccctacaaggggcaatattacagacagaaac
catgagtttttagccactaatgaattggtgtttggcgtgtttttgcccagcggattgaaa
caaaaagagcttttagaaaaaattgaaatcatccaaaagtttttccctaacttttccaaa
gaagcgcttttaaacaattaccaaaaagaaaattcgctttataaccataatctcattaaa
gtggttggcttcatcccttatactaccatgcaatctctttatgccaaactcatccaaact
caaggcatttttgcgcttcccttagacaagcgctactaccctaataacgctttagcttcg
catgttttaggctatgtgggggtggcaagcttgcaagatttgaaagacgatgaagagaat
caatacagccagattgtgggcaaaaccggcgttgaaaaagaatacaacaagctcttacaa
ggcaaggtgggctataaaatcatgcgcgtcaatgcgctcaatcaagaattagccacctta
gaagtagtgccgccaagcgccaacaaccacttgcaattgagtttagacaaacgcttgcaa
aaagaagcagacaagctctttgaaaataaaaggggggctattttagtgatggatgcagaa
aacggggaattgctcgttgcaggaagttaccctgaatacaatttgaacgattttgtaggc
gggatcagtcaagacaaatggcaaaaacttcaagatgatatttataaccccctattaaac
cgcttcgctaacgccttgtacccgccgggatctgtggttaaaatgggcgtgggcttgagc
tttttagaaaaccttaacatcacagaaaacaccaccatacccaccccgccttttattgaa
gtgggtaagcgcaaattcagagactggaaaaaaacagggcatggcaattctaatttgtat
aaagccattagggagtccgtggatgtgtatttttataagtttgggcttgaaatctctata
gaaaaactctctaaaaccttaagggaagtgggctttggggaaaaaacgggcgttgatttg
ccgaatgaatttgtggggattgtgccggataatttgtggaaattcaaacgcttcaatcaa
gattggcgcgttggggacacgctcattaccgctattgggcaaggctcttttttggccacg
cccttgcaggttctagcctacacgggactcattgctacgggcaaactggcaacgcctcat
ttcgctatcaacaacaaacaaccgctcaaagatcccctaaacagctttcaaaaaaagaag
ctccaagccttgagagtgggcatgtatgaagtgtgtaaccataaagacggcaccgcttat
cattccacaaggggttctaaggttactttggcgtgcaaaaccggcaccgcgcaagtcgtg
gaaatcgctcaaaacatcatcaatcgcatgaaagaaaaggatatggaatatttccatcga
tcccatgcgtggattaccgcctttttgccttatgaaaaacccaaatacgctatcactatt
ttagtagaacatggggaaggggggtcaaaactggggggcttgttagtgaaaatgagtaat
aaactctatgagcttggctatcttaaccaattgtaa
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