Helicobacter pylori oki128: HPOKI128_01420
Help
Entry
HPOKI128_01420 CDS
T03724
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hpyd
Helicobacter pylori oki128
Pathway
hpyd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HPOKI128_01420
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyd03400
]
HPOKI128_01420
Enzymes [BR:
hpyd01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HPOKI128_01420
DNA repair and recombination proteins [BR:
hpyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HPOKI128_01420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
CcmE
Viral_P18
DUF6645
Motif
Other DBs
NCBI-ProteinID:
AHN37238
LinkDB
All DBs
Position
261713..262975
Genome browser
AA seq
420 aa
AA seq
DB search
MDVLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKDSQSAIRCVLFKG
NANRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLALEQLKEKLRLKG
YFDEANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCINALMQGEGCVQSV
VESIAYADSFHDTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAKTFSMSAIGHESD
FLLSDLVADLRASTPSNAMEILLPSSNEWLQRLDGFNLKLHRSFKILLHQKKAHLEHLEA
SLKRLSFENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTLTSLFLQTKTERL
NRLENALKLAHAHLKLPQFGAFVSKNNQAIELETLKRGDKIELSNEKAQASAEILSVDRV
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
gtggatgtattgagcgtgagcgaaatcaatgcgcaaatcaaagcccttttagaagcgact
tttttgcaagttagggttcaaggggaagtgagtaatttgacgatccataaggtgagcggt
catgcgtatttttcgctcaaagacagccagtcagccatcagatgcgtgctgtttaaaggg
aacgctaacaggctcaaattcgctttaaaagaagggcaggaagtggttgtttttgggggc
attagtgcgtatgttccaaggggggattatcaaatcaattgctttgaaatagagcctaaa
gatataggttcattaaccctagctttagagcaattgaaagaaaaattacgccttaagggc
tattttgatgaagccaataaattacccaaaccgcattttcctaaacgagtggcagtcatc
acttctcaaaattcggccgcttgggcggacatgaaaaagatcgcttccaaacgatggccg
atgtgtgaattagtttgcatcaatgcgttaatgcaaggggagggctgcgttcaaagcgtg
gtggagagcatcgcttatgcggatagttttcatgatacaaaaaacgcttttgatgcgatt
gtggtggctaggggtggggggagcatggaggatttgtattctttcaatgatgaaaaaatc
gctgatgcattgcatttggctaaaactttcagcatgtcagctattgggcatgagagcgat
tttttattgagcgatttggtagcggatttaagggcttctacgccttcaaacgcgatggag
attttactccctagcagcaatgaatggttgcaaagacttgatgggtttaatttgaaattg
caccgctcttttaaaattttgctccatcaaaaaaaggcgcatttagagcatttagaggct
tctttaaaacgattgagttttgaaaacaagcaccatttaaacgctttaaaactagagaaa
ttaaaaatcgccctagaaaataaaaccctagaatttttacgctttaaaaaaacgctttta
gaaaaaatctctactcaaacattaacaagcctttttttacaaactaaaacagagcgatta
aacaggctagaaaacgcccttaaactcgctcatgcacatttgaaattacctcaatttggg
gcgtttgtgagcaaaaataaccaagcgatagaattagagacattaaaaaggggcgataaa
attgaattgagcaatgaaaaagcccaagcgagcgctgaaattttgagcgtggatagggtg
tag
DBGET
integrated database retrieval system
