Helicobacter pylori oki128: HPOKI128_02965
Help
Entry
HPOKI128_02965 CDS
T03724
Name
(GenBank) DNA mismatch repair protein MutS
KO
K07456
DNA mismatch repair protein MutS2
Organism
hpyd
Helicobacter pylori oki128
Pathway
hpyd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HPOKI128_02965
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyd03400
]
HPOKI128_02965
DNA repair and recombination proteins [BR:
hpyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HPOKI128_02965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Smr
MutS_V
AAA_22
AAA_21
AAA_15
Relaxase
Thiamine_BP
VWA_2
Motif
Other DBs
NCBI-ProteinID:
AHN37513
LinkDB
All DBs
Position
complement(580988..583234)
Genome browser
AA seq
748 aa
AA seq
DB search
MNNNNTPPKPLEESLDLKEFIALFKTFFAKERDTIALENDLKQTFTYLNEVDAIGLPTPK
SVKESDLIVIKLTKLGTLHLDEIFEIVKRLHYIVILQNAFKTFTHLKFHERLNAIVLPPF
FNDLIALFDDEGKIKQGANATLDALNESLNRLKKESAKTIHHYTRSKELAPYLVDTQSHF
KHGYECLLLKSGFSSAIKGVVLERSANGYFYLLPEIAQKIAQKIAQIGNEIDCCIVEMCQ
TLSHSLQKHLLFLKFLFKEFDFLDSLQARLNFAKAYNLEFVMPSFTQKKMILENFSHPIL
KEPKPLNLKFEKSMLAVTGVNAGGKTMLLKSLLSAAFLSKHLIAMKINAHHSIIPYFKEI
HAIINDPQNSANNISTFAGRMKQFSALLSKENMLLGVDEIELGTDADEASSLYKTLLEKL
LKQNNQIVITTHHKRLSVLMAENKEVELLAALYDEEKERPTYTFLKGVIGKSYAFETALR
YGVPHFLIEKAKAFYGEDKEKLNVLIENSSALERELKQKKEFLENALKEQEDLKNAWLLE
MEKQKEIFHNKKLELEKSYQQALNLLKSEVASKDTSSMHKEIHKASEILNKHKTNQEIPQ
IITSFQANEKARYKNESVLVVQILDKGYYWIETELGMRLKAHGSLLKKIQKPPKNKFKPP
KTTIPKPQKASLRLDLRGQRSEEALDSLDAFLNDALLGGFEEVLICHGKGSGILEKFVKE
FLKNHPKVVSFSDAPINLGGSGVKIVKL
NT seq
2247 nt
NT seq
+upstream
nt +downstream
nt
atgaataataataataccccacccaaacccctagaagaaagcctggacttaaaagagttt
atcgctctttttaaaaccttttttgcaaaagaaagagatactattgctttagaaaacgat
ctcaagcaaactttcacttatttaaacgaagtggatgcgatcggtttgcctacccctaaa
agcgtgaaagaaagcgatctgattgtcatcaaactcaccaaattagggacgctccattta
gatgaaatttttgagattgtcaaacgattgcactacattgtcattttacaaaacgctttt
aaaactttcacgcatttaaaatttcatgaacgccttaacgctattgtcctgccccctttt
tttaatgatttaatcgctttatttgatgatgaaggaaaaatcaaacaaggggctaacgct
accctagacgctttgaatgaaagcttgaaccgccttaaaaaagagagcgccaaaaccatt
caccattacacgcgctctaaagagcttgccccttatttagtggatacgcaaagccacttt
aagcatggttatgaatgccttttattaaaaagcgggttttctagcgcgattaaaggcgtt
gtgctagaaaggagcgctaatggctatttctatcttttgcctgaaatcgcgcaaaaaatc
gcgcaaaaaatcgcgcaaattggtaatgaaatagattgctgtattgttgaaatgtgtcaa
actctaagccatagcttgcaaaaacaccttttatttttaaaattcctttttaaagaattt
gattttttagacagcttgcaagcccggcttaatttcgctaaagcctacaatttagaattt
gtcatgccaagcttcactcaaaaaaaaatgattttagaaaacttttcgcaccctatttta
aaagagccaaagcccttaaatttgaagtttgaaaaatccatgctcgctgttaccggcgtg
aatgcgggcgggaaaaccatgctcttaaaatcgcttttaagcgcggcttttttaagcaag
catctcattgctatgaaaatcaacgcccaccattccattatcccctattttaaagaaatc
cacgctattattaatgacccccaaaacagcgcgaacaatatctctacttttgccggcaga
atgaagcaatttagcgctcttttatccaaagaaaacatgcttttaggcgttgatgaaatt
gagctagggactgacgctgatgaagcgagcagtttgtataaaaccctgttagaaaaattg
cttaaacaaaacaaccaaatcgttatcaccacgcaccacaaacgcctgagcgtgttaatg
gcagaaaacaaggaagtggaattactagccgctctttatgatgaagaaaaagaacggccc
acttacacttttttaaaaggggttattggcaaaagctatgcgtttgaaaccgctttgcgc
tatggcgtgccgcattttttgattgaaaaagcaaaagccttctatggcgaagataaggaa
aaattgaatgttttgattgaaaattctagtgctctagaaagggaattgaagcaaaaaaag
gaatttttagagaacgctttaaaagagcaagaagatttaaaaaacgcatggcttttagaa
atggaaaaacaaaaagaaatctttcacaataaaaaattggaattggaaaaatcctaccaa
caagccctaaatctcttaaaaagcgaagtcgcttcaaaagataccagctccatgcataaa
gaaatccataaagcgagcgaaattttaaacaagcataaaacaaaccaagagatcccacaa
atcataacgagctttcaagccaacgaaaaagcgcgctataaaaatgaaagcgtgctggtt
gtgcaaattttagacaagggctattattggatagaaaccgagcttggcatgcgtttaaaa
gcgcatgggagtttgttgaaaaaaatccaaaaaccccctaaaaacaaattcaaaccccct
aaaacaaccattcctaaaccccaaaaggcgagcttacgccttgatttaagggggcaacgc
agcgaagaagccctagattcactagacgcttttttaaacgacgcgcttttagggggcttt
gaagaagtgcttatttgccatggcaaagggagtgggattttagaaaagtttgtgaaagaa
tttttaaaaaaccaccctaaagtggtaagctttagcgacgctcccattaatttaggcggt
agtggggttaaaatcgttaaattgtag
DBGET
integrated database retrieval system
