Helicobacter pylori oki128: HPOKI128_03305
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Entry
HPOKI128_03305 CDS
T03724
Name
(GenBank) membrane protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
hpyd
Helicobacter pylori oki128
Pathway
hpyd00540
Lipopolysaccharide biosynthesis
hpyd01100
Metabolic pathways
Module
hpyd_M00867
KDO2-lipid A modification pathway
Brite
KEGG Orthology (KO) [BR:
hpyd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPOKI128_03305
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpyd01005
]
HPOKI128_03305
Lipopolysaccharide biosynthesis proteins [BR:
hpyd01005
]
Lipid A
HPOKI128_03305
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
AHN37579
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All DBs
Position
659263..660264
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AA seq
333 aa
AA seq
DB search
MFFKFILYLLLGTFAWAKEDILTPLTPSKRYSINLMTENDGYINPYIDEYYTAGNQIGFS
TKEFDFSKNKAMKWTSYLGFFNKSPRVTRFGISLAQDMYTPSLENRKLVHLHDNHPYGGY
LRVNLNVYNRHQTFMELFTLSLGATGQDSLAAQTQHLIHKWGHDPQFYGWNTQLKNEFIF
ELHYQLLKKVPLLKTRFFSMELMPGFNVELGNARDYFQLGSLFMAGYNLDADYGVNKVNT
AFDGGMPYSDKFSIYFFAGAFGRFQPLNIFIQGNSPETRGIANLEYFVYASEIGAAMMWR
SFRVAFTITDISKTFQSQPKHHQIGTLELNFAF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
ttgtttttcaaattcattttatatttattattaggaacatttgcatgggcaaaagaggat
attcttactccattaacgccctctaaacgctattctatcaatttgatgactgaaaatgat
ggttatatcaacccttacattgatgagtattataccgcaggcaaccaaataggcttttct
actaaagagtttgatttttctaaaaataaagcgatgaaatggacttcgtatttaggattt
ttcaataaaagccctagggttactcgttttggcatttctctcgcccaagacatgtatacc
ccttcacttgaaaacagaaaactggtgcatttgcatgacaaccacccttatggggggtat
ttgagggtgaatttgaatgtgtataaccgccatcaaacttttatggagttattcacgctt
tctttaggtgcaacagggcaagattctttggccgctcaaacgcagcatctcattcataaa
tggggccatgacccccaattttatggctggaacacacagctcaaaaacgaatttatcttt
gaattgcactaccaattgctcaaaaaagtcccccttttaaagactcgttttttttctatg
gagttaatgcctgggtttaatgtggaattgggtaatgcgagggattatttccaactcggc
tcgctctttatggctgggtataacttggacgctgattatggggtcaataaggtcaatacc
gcttttgatggaggcatgccttatagcgataaattttccatctattttttcgcaggggct
tttgggcgcttccaaccccttaacatcttcattcaaggcaatagccctgaaactaggggc
attgctaatttggaatactttgtttatgccagtgaaataggagcggctatgatgtggcgc
agctttagggtggcttttacgattaccgatattagtaaaacctttcaatcccagcctaaa
caccaccaaatcggcactttagaattgaattttgccttttga
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