Helicobacter pylori oki128: HPOKI128_03335
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Entry
HPOKI128_03335 CDS
T03724
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hpyd
Helicobacter pylori oki128
Brite
KEGG Orthology (KO) [BR:
hpyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyd03032
]
HPOKI128_03335
03400 DNA repair and recombination proteins [BR:
hpyd03400
]
HPOKI128_03335
Enzymes [BR:
hpyd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HPOKI128_03335
DNA replication proteins [BR:
hpyd03032
]
Prokaryotic type
DNA Topoisomerases
HPOKI128_03335
DNA repair and recombination proteins [BR:
hpyd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPOKI128_03335
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
AHN37585
LinkDB
All DBs
Position
667174..669660
Genome browser
AA seq
828 aa
AA seq
DB search
MQDNLTNETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMHELG
LTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPTHRIDEIIDALVHILENPNAGLDEILEFVKGPDFPTGGIIYGKAGIIEAYKTG
RGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLRLFLNHR
KTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVRLIKTSQSPEAAKNALMERFTLSE
IQSKAILEMRLQRLTGLERDKIKEEYQNLLELIDDLNGILKSEDRLNEVVKTELLEVKEQ
FSSQRRTEIQEVYENIDIEDLIANEPMVVSMSYKGYVKRVDLKAYERQNRGGKGKLSGNT
YEDDFIENFFVANTHDILLFITNKGQLYHLKVYKIPEASRIAMGKAIVNLISLAPDEKIM
ATLSTKDFSDERSLAFFTKNGVVKRTNLSEFGSNRSYSGIRAIVLDEGDELVSAKIVDKN
AKHLLIASYFGIFIKFPLEDVREIGRTTRGVIGIRLNENDFVVGAVVISDDGNKLLSVSE
NGLGKQTLAEAYREQSRGGKGIIGMKLTQKTGNLVSVISVDDENLDLMILTASAKMIRVS
IKDIKETIGRNTSGVKLIDTADKVVYANSCPKEEEPENLENPPTQLFE
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataatttaaccaatgaaacaaaaaatattgtagaagtggggattgattcttct
attgaagagagctatttagcttattcaatgagcgtgatcatagggcgcgctttaccggac
gctagagatggcttaaagcctgtgcataggcgtattttgtatgcgatgcatgaattaggc
cttacttccaaagtcgcttataaaaaaagcgctaggatcgtgggtgatgtgattggtaaa
taccacccccatggcgataatgcggtttatgatgcgctagtgagaatggcgcaagatttt
tctatgcgtttggaattagtggatgggcaaggcaactttggctctattgatggcgataac
gctgcggcgatgcgttacactgaagccagaatgaccaaggcgagtgaagaaattttaagg
gatattgataaagacaccattgattttgtgcctaattatgatgacaccttaaaagagcca
gatattttaccaagccgtctgcctaaccttttagtcaatggggctaatgggatcgctgta
gggatggcgacttctatccccactcacaggattgatgaaatcatagacgctttagtgcat
atattagaaaaccctaacgctggattagatgaaattttagaatttgtcaaagggcctgac
tttcccactggtgggatcatttatggcaaggcgggtattattgaagcctataaaacgggg
cgagggcgcgtgaaagtgcgcgccaaagtgcatgtggaaaagacgaaaaataaagaaatc
atcgttttagatgaaatgccttttcaaaccaataaagccaaattagtggaacaaatcagc
gatttagcgcgagaaaaacaaattgaaggcattagcgaagtgcgcgatgagagcgataga
gagggtattagagtggtgatcgaattaaaaagagacgcgatgagtgaaattgtcttaaac
cacctctacaaactcaccaccatggagaccacttttagcatcattttactcgctatttat
aataaagagcctaagattttcacgcttttagagttgttgcgccttttcttaaaccacaga
aaaaccattattataagacgcactatttttgaattagaaaaggctaaggctagagcgcat
attttagagggctatttgattgcgttagacaatattgatgaaatcgtgcgactcattaaa
acaagccaaagcccagaagcggccaaaaacgccttaatggagcgttttactttgagcgaa
atccagagcaaagccattttagaaatgcgtttgcagcgcttaacaggccttgaaagagat
aaaatcaaagaagaataccaaaacttgttggagcttattgatgatctcaatggcatttta
aagagcgaagatcgcttgaatgaggtcgtcaaaacagagcttttagaagtcaaagagcaa
ttttcttctcaaaggcgcactgaaattcaagaagtttatgaaaatattgacatagaagat
ttgatcgctaatgagcctatggtggtgagcatgagctataaaggctatgtgaaaagagtg
gatttaaaagcttatgaaaggcaaaatcgtggcggtaagggcaagctttcaggcaacact
tatgaagacgatttcattgaaaacttttttgtggctaacacgcatgatattttgctcttt
atcaccaataaggggcaattgtatcatttgaaagtctataagatcccagaagcgagccgg
atcgctatgggtaaagctatcgtgaatttaatctcgctcgctcctgatgaaaagatcatg
gcgactctaagcaccaaagactttagcgatgaacgctctttagctttcttcacgaaaaat
ggtgtggtgaagcgcaccaatttgagcgaatttggcagcaataggagttatagcggtatc
agagcgattgttttagatgaaggcgatgaattagtgagcgcaaaaattgtggataaaaac
gccaagcatttgctcatcgcatcgtattttggcattttcattaaattccctttagaagat
gtgcgcgagatcggaagaactactcgtggggttatagggattagactgaatgaaaatgat
tttgttgtcggtgcggtcgttattagcgatgatggcaacaagcttttgagcgtgagtgaa
aacgggcttggcaagcaaactttagccgaagcgtatagagagcaatctcgtggcggtaag
gggatcattggcatgaagctcactcaaaaaaccggcaatctggtgagcgttatcagcgtg
gatgatgaaaacctggatttgatgatccttactgcaagtgcgaaaatgatcagagtttct
attaaagatattaaagaaaccatcggaagaaatactagtggggtaaaactcatagacacc
gccgataaagtcgtgtatgccaattcttgccctaaagaagaagagccagaaaatttagaa
aatcctcccacacaattgtttgaatga
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