KEGG   Helicobacter pylori oki128: HPOKI128_03625
Entry
HPOKI128_03625    CDS       T03724                                 
Name
(GenBank) ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
hpyd  Helicobacter pylori oki128
Pathway
hpyd03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hpyd00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    HPOKI128_03625
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hpyd03019]
    HPOKI128_03625
Messenger RNA biogenesis [BR:hpyd03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     HPOKI128_03625
SSDB
Motif
Pfam: HD RNase_Y_N KH_1 HDOD UPF0242 KH_KhpA-B
Other DBs
NCBI-ProteinID: AHN37636
LinkDB
Position
complement(724802..726391)
AA seq 529 aa
MSSGLIYISLEVLVACLITALIMYYVMKRIYYARGQTILKGASAKAKLMEFQAKSFVEAE
EMRMKSQECKLQQQYENKNLQLQTHFEKKEAHLKHLEAQHKEFVRDEKRYLEKEKQELEK
ERQILEQERENFKRQRAVCKEAQAKALDAMLNYLAYTKDEIKNMVLEQLEEELEAQKSAL
IKRYEKEAKEEGKKKSYAILAEATARFAGNYATENLTTRIALPCSDYIGRVIGKDGKNIE
AFEKVSGVDIEFSEGSSELYLSSFNLYRRKVASETLKILIEDGRIQPNRIEEVYHRVARN
MEKELLSEGESVVLELELGAMEDELKILIGKMRYRSSFGQNALEHSKEVALLAGLIAEQL
GGDKKLARRAGILHDIGKALTQELGRDHVNLGVEVCKHHKEDPVVINAIYAHHGHEEIMS
VECASVCAADALSAGRPGARRKSDEEYAKRMQALEEIALEFDGVEKAYAMESGRELRVIV
KSNQVRDNQVPIIARKIAKKIEESTQYVGEVGVQVVRESRFKTTATLKQ
NT seq 1590 nt   +upstreamnt  +downstreamnt
atgagcagcgggttaatttacatttcattagaagtcttggtagcgtgtttgattaccgct
ctaatcatgtattatgtgatgaaaaggatctattatgctagagggcaaaccattttaaaa
ggcgcttcagctaaagccaaattaatggagtttcaagcgaaatcttttgtggaagctgaa
gagatgcgcatgaaaagccaagaatgcaaattgcaacagcaatacgaaaacaagaatttg
caactccaaacccattttgaaaaaaaagaagcgcatttgaagcatttagaagcgcagcac
aaagaatttgtaagggatgaaaaacgctatttagaaaaggaaaaacaagagcttgaaaaa
gaacgccaaattttagaacaagagagagaaaattttaaaagacagcgcgctgtttgcaaa
gaagctcaagccaaagcgctagatgcgatgcttaattacttggcttataccaaagatgaa
attaaaaacatggttttagagcaattagaagaagaattagaagcccaaaaaagcgcgtta
atcaagcgttatgaaaaagaagccaaagaagagggcaagaaaaaatcgtatgccatttta
gcggaagcgacagcccgttttgcgggtaattatgcgacagagaatttaacaactcgcatt
gctttgccttgctcagattatatcggtcgtgtgataggcaaagacgggaaaaatattgaa
gcgtttgaaaaggtcagtggggtggatatagaatttagcgaaggtagcagcgaattgtat
ttgtccagtttcaatctttatcggcgtaaagtggcgagcgagacgcttaaaattttaata
gaagacggccgtatccagcctaacaggattgaagaggtctatcatagagtcgcgcgcaac
atggaaaaagaattgctttctgaaggggagagcgtggtgttagaattagagcttggggct
atggaagatgagcttaaaattttaataggcaaaatgcgttatcgctccagttttgggcaa
aacgccttagagcattctaaagaagtcgctcttttagccggcttgattgcagagcaactt
ggaggggataaaaaactcgccagaagagccggtattttgcatgatattggtaaagcgctc
acccaagagcttgggagagaccatgtgaatttaggggttgaagtgtgtaagcaccataaa
gaagacccggttgtgatcaatgcgatttatgcccaccatgggcatgaagagatcatgagc
gtagagtgcgcgagcgtgtgcgcggctgatgcgctttcagcagggcgtcctggggctaga
agaaagagcgatgaagaatacgctaaacgcatgcaagctttagaagagatcgcgctagaa
tttgatggggtggaaaaagcgtatgcgatggagagcgggcgagaattaagagtgattgtc
aaatccaaccaagtcagggacaatcaagtgcctattattgccagaaagatcgctaaaaag
atagaagagagcactcagtatgtgggcgaagtgggcgtgcaagtggtgcgagaaagccgt
ttcaaaacgaccgctacgctcaagcaataa

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