KEGG   Helicobacter pylori oki128: HPOKI128_04600
Entry
HPOKI128_04600    CDS       T03724                                 
Name
(GenBank) RNA pseudouridine synthase
  KO
K06179  23S rRNA pseudouridine955/2504/2580 synthase [EC:5.4.99.24]
Organism
hpyd  Helicobacter pylori oki128
Brite
KEGG Orthology (KO) [BR:hpyd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hpyd03009]
    HPOKI128_04600
Enzymes [BR:hpyd01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.24  23S rRNA pseudouridine955/2504/2580 synthase
     HPOKI128_04600
Ribosome biogenesis [BR:hpyd03009]
 Prokaryotic type
  rRNA modification factors
   23S rRNA modification factors
    HPOKI128_04600
SSDB
Motif
Pfam: PseudoU_synth_2
Other DBs
NCBI-ProteinID: AHN37809
LinkDB
Position
complement(929298..930026)
AA seq 242 aa
MEKAYKILSVQENISHKKAKALIDLGLVSVGGKKLMVARKELPKNTHFSVQKVEKPSVIF
EDENILALFKPPFIESYDLVSFFKGWVLLHRLDKETSGVILLMRENSEFHLKAKKAFKDR
AVKKEYLALAQGIIEEEQEINAPILTIKTTKAFSKISKKGQEAITIITPLKIINKKTLLK
VGIKTGRTHQIRVHLKHINHPIIGDTLYNNEPGSAKRLMLHAHKISLLGYEFEAIPPKEF
EF
NT seq 729 nt   +upstreamnt  +downstreamnt
atggaaaaagcttataaaatattgagcgttcaagaaaacatttcgcacaaaaaagccaaa
gctttgattgatttggggttagtgagtgtaggggggaaaaaattgatggttgccagaaaa
gaattgcctaaaaacacgcattttagcgtccaaaaggttgaaaaacccagcgtgattttt
gaagatgaaaacattctagccctttttaaacccccctttatagagagctatgatttagtt
tcttttttcaaaggttgggttttgttgcaccgcttggataaagaaacaagcggggtgatt
ttattgatgagagaaaattcagaattccatttaaaagcgaaaaaggcttttaaagacagg
gcggttaaaaaggagtatttagcgctcgctcaaggcattatagaagaagagcaagaaatt
aacgctcccattctcacgattaaaaccactaaagctttcagtaaaatctctaaaaaaggg
caagaagccattacgataatcacgcccttaaaaatcatcaataaaaaaacccttttaaaa
gtgggaattaaaaccggaagaacgcatcaaatcagagtccatttaaagcacatcaaccac
cccattataggcgatacgctttataataatgagccaggttcagccaaacgcttgatgctc
catgcgcataaaatctcgttattggggtatgaatttgaagcgatcccccctaaagaattt
gaattttaa

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