Helicobacter pylori oki128: HPOKI128_05150
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Entry
HPOKI128_05150 CDS
T03724
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hpyd
Helicobacter pylori oki128
Brite
KEGG Orthology (KO) [BR:
hpyd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpyd03016
]
HPOKI128_05150
Enzymes [BR:
hpyd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HPOKI128_05150
Transfer RNA biogenesis [BR:
hpyd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPOKI128_05150
Prokaryotic type
HPOKI128_05150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AHN37892
LinkDB
All DBs
Position
1049711..1050439
Genome browser
AA seq
242 aa
AA seq
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MRCFKATIAYDGAYFLGYAKQPNKLGVQDKIESTLNALGIKSAVIAAGRTDKGVHANNQV
LSFYAQKHWNAAKLFYYLAPKLAPHIVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
APYIACGDYGSLDALNTALKQFIGKHDFSMFKKEGGAMTNPKRAIFNAFAYKTFIAGHEC
VVFKIIGDAFLRSSVRLIIQACVQYSLEKITLAEIQAQIHNTKAAIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttaaggctactatcgcttatgatggggcgtattttttaggctatgccaaa
cagcctaacaaactcggcgttcaagataagatagagagcactttaaacgcgctagggatt
aaaagtgcagtcatagcggctgggcgcacggataaaggcgtgcatgcgaacaaccaagtg
ctgtctttttacgctcaaaaacactggaatgccgctaaattattttattatctagcccct
aaactcgccccgcatattgtcttaaaaaagctagaagaaaaaaacttccatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttgacgaagaatttaaaaacgcctttttta
gcgccttatatcgcttgtggggattatggctcactagatgcgttaaacaccgctttaaag
caattcataggcaagcatgatttttccatgtttaaaaaagaaggcggggcgatgaccaat
cctaaacgcgctatttttaacgcttttgcttataaaacctttatcgcagggcatgagtgc
gtggtgtttaaaatcattggcgatgcgtttttgcgctctagcgtgcgtttgatcattcaa
gcgtgcgtccaatactccttagaaaaaatcacgctcgctgaaattcaagcgcaaatccac
aacaccaaagccgctataagaacgcccataatggctaatggcttgtatttgcacagggtg
tattattga
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