Helicobacter pylori oki128: HPOKI128_06230
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Entry
HPOKI128_06230 CDS
T03724
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpyd
Helicobacter pylori oki128
Pathway
hpyd03030
DNA replication
hpyd03430
Mismatch repair
hpyd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPOKI128_06230
03430 Mismatch repair
HPOKI128_06230
03440 Homologous recombination
HPOKI128_06230
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyd03032
]
HPOKI128_06230
03400 DNA repair and recombination proteins [BR:
hpyd03400
]
HPOKI128_06230
Enzymes [BR:
hpyd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPOKI128_06230
DNA replication proteins [BR:
hpyd03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPOKI128_06230
DNA repair and recombination proteins [BR:
hpyd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPOKI128_06230
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AHN38079
LinkDB
All DBs
Position
1259831..1260802
Genome browser
AA seq
323 aa
AA seq
DB search
MIKISLNSNKWAWMWWFQGVIFLNLKIVSWLLKAYRMSDSLLHKDIQALIARLKHQDLSL
GMLEKSLSRLIYDEVNLEYLKACGLNFVETSENLITLKNLKTPLKDEVFSFIDLETTGSC
PLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYIAELTGIAYEDTLNAPSAHEALQEL
RLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNLKLCTLDLSKRAILSMRYSLSFLKE
LLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKTTMDLIDFSKCANTLIKRPPRARHQ
ETLPPFSLFERTKGLLNIIKATS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatatctttgaactccaacaagtgggcgtggatgtggtggtttcagggagtt
atatttttaaatctaaagatcgtaagctggctattgaaggcttacagaatgtcagacagc
ctcttgcataaagatattcaagccctaatcgctcgcttaaagcaccaggatttaagctta
ggcatgctagaaaaatcgctctctcgccttatttatgatgaagtcaatttggaatattta
aaagcgtgcgggcttaatttcgtagaaacgagcgaaaatttaatcacgctcaaaaacctt
aaaaccccccttaaagatgaggttttttcctttattgatttagaaaccaccggctcttgc
cccctaaagcatgagattttagaaatcggagccgtgcaagttaaggggggggaaatcatc
aatcgttttgaaacccttgtgaaagtcaaaagcgttcctgattatatcgctgagcttaca
ggcatcgcttatgaagacaccctaaacgccccaagcgcgcatgaagctttgcaagaattg
cggctttttttaggcaatagcgtgtttgtagctcataacgctaattttgattacaacttt
ttagggcgttattttgtagaaaaattgcattgccccttattgaatttaaagctttgcact
ttggatttatccaaacgggccattttgtccatgcgttattctttgagctttttaaaagag
cttttagggtttggtatagaagtcagccatagagcctatgcggacgctttagcgagctat
aagctctttgaaatatgcttattaaacttgcccagctacatcaaaacgacaatggatttg
attgatttttccaaatgcgctaacaccttgatcaaaagacccccaagagccagacaccaa
gagactctaccgccattttctctttttgagaggacaaagggtttgttaaatatcataaaa
gcaaccagttaa
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