KEGG   Helicobacter pylori oki128: HPOKI128_06380
Entry
HPOKI128_06380    CDS       T03724                                 
Name
(GenBank) DEAD/DEAH box helicase
  KO
K01156  type III restriction enzyme [EC:3.1.21.5]
Organism
hpyd  Helicobacter pylori oki128
Brite
KEGG Orthology (KO) [BR:hpyd00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:hpyd02048]
    HPOKI128_06380
Enzymes [BR:hpyd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.21  Endodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.21.5  type III site-specific deoxyribonuclease
     HPOKI128_06380
Prokaryotic defense system [BR:hpyd02048]
 Restriction and modification system (R-M system)
  Type III R-M system
   HPOKI128_06380
SSDB
Motif
Pfam: RE_endonuc ResIII DEAD AAA_22 ACT_9 Speriolin_C
Other DBs
NCBI-ProteinID: AHN38102
LinkDB
Position
1294203..1297118
AA seq 971 aa
MKIKFKRLDYQEKCLNQILGVFKGIYLREPENDSQRISNPVFEIGEIKDLLLENIQNLRS
EQKITQESVGIDKSLNCDILMETGTGKTFCFLECVYALHQNYHLSKFIVLVPSNAIKLGV
LKSVEITREFFKSEYSTHLESYEDIRSFILASNHKCCVLVMTFSAFNKEGNVINKSCLEN
TNLFNGAKSYMQALASIRPVVIMDEPHRFLGDKTKKYLEQLNALVTLRFGATFKDDYKNL
IYALDSKKAFDCALVKSISVASVGESNEYFLELKGVVKTQNDYEAAINYTNLENKTQSVK
VKKHDNLGVLTQISALEDYIVENITKTEARFLNGFNLLLDQKEPFSHLLEGEQEVMLKEA
IKSHFEREEGLFKKGIKALCMVFISGVNSYLSENEKPAKLALLFEKLYQQKLEEVLKKEN
LDNNYRAYLERTKDDIQKVHGGYFAKSKKESDEAQVIALILKEKEKLLSFESDLRFIFSQ
WALQEGWDNPNVMTICKLAPSHSNITKLQQIGRGLRLAVNDKGERITKEHADFDFVNELV
VIVPQVEGDFVGAIQQEISEHSLMKQAFSGEELEKSGIVKKGYYGALLETLEGLGFGEKT
DDENFKLTLNQNEFLEKEPELEKLKDEKYLDLEKLKDFLKDRLVGHFRVRNKNERKSEKI
KINKENFKKFEALWEGLNHQARIAYAIDSESLIDEIVKKINASFNVKSKIVSVTTHKKVE
TMGNDAKTESFEQKSACVWSLHEFISALSNKVKLSFKSVAKVLENIDENKFDLIKKNEQE
SLRRLEELFLEMIYQNIKDKISYQMRETIIKNRKNDAFYDEKGEIREFLDGSLVGDKYEI
KNSSAQEKCLYENFMQVESEIEKDTIEESNDTKIIVFGKLPRVKIPIGLNQTYSPDFGYV
VENNDKKVLLVVETKGVKNESELREEEKHKISTAKKFFEALKKQGVNIEYKTKMEKDQLS
ALINEVLNRKD
NT seq 2916 nt   +upstreamnt  +downstreamnt
atgaaaatcaaattcaaacgattggattatcaagaaaaatgcttgaatcaaattttaggg
gtgtttaaggggatctatttgagagagccagaaaatgactctcaaaggatttctaaccct
gtttttgaaataggggagatcaaagatcttttattagaaaatatccaaaacttgcgatca
gagcaaaagataacccaggaaagcgtggggattgacaagtcgttaaactgcgatatttta
atggaaacaggcacagggaagaccttttgctttttggaatgcgtttatgccttgcaccaa
aactaccatttgtcaaaattcatcgttttagtgccaagtaacgccattaaattaggggtt
ttaaagagtgttgaaatcaccagagaattttttaaaagcgagtattctacgcatttagaa
agctatgaagatataagaagctttattttagcgagtaatcacaaatgctgcgtgttggtg
atgactttttctgccttcaataaagagggtaatgttatcaataaatcatgcttagagaac
acgaatctattcaatggcgcaaaaagttacatgcaagctttagcgagtatccgcccggta
gtgatcatggacgaaccgcaccgatttttaggcgataaaacaaaaaaatatttggaacaa
ttaaacgctttagttacgctcaggtttggggcgacttttaaagatgattataagaatttg
atttatgcactagatagcaaaaaagcgtttgattgcgccctagtgaaaagcattagcgtg
gcgtctgtgggggagagtaacgagtattttttagagcttaaaggggttgtaaagacacaa
aacgactatgaagctgcaattaactacacgaatttagaaaataaaactcaaagcgtcaag
gtcaaaaagcatgataatttaggggtgctaactcaaatcagcgctttagaagattacatt
gtagaaaacatcactaaaactgaggcgcgttttctcaatggctttaatttgttactggat
caaaaagagcctttttctcatcttttagagggcgagcaagaagtgatgctgaaagaagcg
ataaaaagccattttgaaagagaagaagggctttttaaaaaagggattaaagccttgtgc
atggtgtttattagcggggtgaatagctatttaagcgagaatgaaaagccggccaaatta
gcccttttatttgaaaaactctaccagcaaaagcttgaagaagtcttaaaaaaagaaaat
ttagataacaattacagagcgtatttagaacgcaccaaagacgatattcaaaaagtgcat
ggagggtattttgctaaaagcaagaaagagagcgatgaagcccaagtgatcgcgctcatt
ttaaaagaaaaagaaaaattgctgagttttgaatccgatctcaggtttattttttcgcaa
tgggcgttgcaagaggggtgggataaccctaatgtgatgacgatttgcaaattagcccct
agccattccaatatcactaaattgcaacaaatcggtagggggttaagactcgctgtgaat
gataagggcgaacgcatcactaaagagcatgctgattttgattttgtcaatgaattggtg
gtgatcgtgccgcaagttgagggggattttgtgggagcgatccagcaagagataagcgag
catagcttgatgaagcaagcgtttagcggtgaagagttagaaaaaagcggcattgttaaa
aaagggtattacggggctttattggaaacattagagggtttgggttttggagaaaaaaca
gatgatgaaaactttaaactcactctcaatcaaaacgaatttttagaaaaagagccggaa
cttgaaaaattaaaagatgaaaaatacctggatcttgaaaaattaaaagattttttaaaa
gatcgtttagtgggccattttagagtgaggaataaaaacgagcgaaagagtgaaaaaatc
aaaatcaataaagaaaattttaagaaatttgaagccttatgggagggcttgaatcatcaa
gctagaatcgcttatgccattgatagcgagagcttgattgatgagattgtcaaaaagatc
aacgcttcttttaatgtcaagtcaaaaatcgtttcggttacgactcataaaaaagtagaa
actatgggaaatgacgccaaaacagagagttttgagcaaaaaagcgcatgcgtgtggagc
ttgcatgaatttatcagcgctttgtctaataaggtgaaattgagctttaaaagcgtggct
aaagtgttagaaaacattgatgaaaacaagtttgatctcattaaaaaaaacgaacaagag
agcttaaggcgtttagaagagctgtttttggaaatgatttatcaaaatattaaagataaa
atttcctatcaaatgcgcgaaacgataattaaaaacagaaaaaacgatgcgttttatgat
gaaaaaggagaaatcagagaatttttagacgggagtttggtgggggataaatatgagatt
aaaaattcaagcgctcaagaaaaatgcctgtatgaaaatttcatgcaagtggagagcgag
attgaaaaagacacgattgaagaatctaacgacactaaaatcattgtttttggcaagctc
cccagggttaagatcccgatagggttaaatcaaacttatagccctgattttgggtatgtg
gttgaaaacaacgataaaaaagtgttgttagtggtagaaactaagggggttaaaaatgaa
agcgaattgcgcgaagaagaaaagcacaaaatttcaaccgctaagaaattttttgaagct
ttaaaaaagcaaggcgtgaatattgaatacaaaactaaaatggaaaaagatcaattaagc
gcgttgattaatgaagttttaaatcgtaaagattag

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