Helicobacter pylori oki128: HPOKI128_07160
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Entry
HPOKI128_07160 CDS
T03724
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hpyd
Helicobacter pylori oki128
Pathway
hpyd03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpyd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPOKI128_07160
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyd03400
]
HPOKI128_07160
Enzymes [BR:
hpyd01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPOKI128_07160
DNA repair and recombination proteins [BR:
hpyd03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPOKI128_07160
Prokaryotic type
HPOKI128_07160
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHN38235
LinkDB
All DBs
Position
1458067..1458768
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AA seq
233 aa
AA seq
DB search
MKLFDCAPLSLAWREFLQSEFKKPYFLEIEKRYLEALKSPKTIFPKSSNLFYALNLTPPS
AVKIILLGQDPYHSTYLENQQELPVAMGLSFSVEKNAPIPPSLKNIFKELHANLGMPVPC
CGDLSAWAKRGMLLLNAILSVEKNQAASHKRIGWEAFSDQILMRLFEANAPLIVVLLGKI
AQKKIALIPKNKHIIITAPHPSPLSRGFLGSGVFTSIQNAHREIYHKDFDFSL
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atgaaactttttgactgcgctcctttaagtttggcttggcgggagtttttgcaaagcgaa
tttaaaaagccttattttttagaaatagaaaaacgctacttagaggctctaaaaagccct
aaaaccattttccccaaaagctctaatctgttttatgcgctcaatctaacgccccctagc
gcggttaaaatcattcttttagggcaagatccctaccattccacctacctagaaaatcag
caagaattgcctgtggcgatgggcttaagctttagcgtggaaaaaaacgcccccatcccc
ccaagcttaaaaaatatttttaaagaattgcatgcgaatttaggcatgcctgtgccttgt
tgtggggatttgagcgcatgggctaaaaggggcatgctgttgttgaacgccattttaagc
gtggaaaaaaaccaagccgcttcgcacaaacgcatcggctgggaagcttttagtgatcag
atattgatgcgcctttttgaagccaacgcccccttgatcgtggtgttattaggaaagatc
gcccaaaaaaagatcgctctaatccccaaaaacaaacacatcatcatcaccgcccctcac
cctagcccattatctagggggtttttagggagtggggtttttacaagcatccaaaacgcc
cacagagagatttatcataaggattttgattttagtttatga
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