Helicobacter pylori oki128: HPOKI128_07225
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Entry
HPOKI128_07225 CDS
T03724
Name
(GenBank) thiouridylase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
hpyd
Helicobacter pylori oki128
Pathway
hpyd04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
hpyd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
HPOKI128_07225
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpyd03016
]
HPOKI128_07225
Enzymes [BR:
hpyd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
HPOKI128_07225
Transfer RNA biogenesis [BR:
hpyd03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
HPOKI128_07225
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
QueC
DUF7411
Asn_synthase
ThiI
Diphthami_syn_2
THF_DHG_CYH
Arginosuc_synth
NAD_synthase
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
AHN38247
LinkDB
All DBs
Position
1467287..1468315
Genome browser
AA seq
342 aa
AA seq
DB search
MKIAVLLSGGVDSSYSAYSLKEQGHELVGIYLKLHASEKKHDLYIKNAQKACEFLGIPLE
VLDFQKDFKSAVYDEFISAYEEGQTPNPCALCNPLMKFGLALDHALKLGCEKIATGHYAR
VKEIDKVSYIQEALDKTKDQSYFLYALEHEVIAKLVFPLGDLLKKDIKPLALNAMPFLGT
LETYKESQEICFVEKSYIDTLKKHVEVEKEGVVKNLQGEIIGTHKGYMQYTIGKRKGFSV
KGALEPHFVVGIDAKKNELIVGKKEDLATRFLKAKNKSLTKDFKNGEYFIKARYRSVPAK
AFVSLRDEMIEVEFEEPFYGVAKGQALVVYKDDILLGGGVIV
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatagcggtattactcagtgggggggtggatagctcttatagcgcttatagctta
aaagagcaagggcatgaattagtggggatttatttgaaactccatgcgagcgaaaaaaag
catgatttatacattaaaaacgctcaaaaagcgtgcgagtttttaggcattcctttagag
gtgttggattttcaaaaggattttaaaagcgcggtttatgatgaatttatcagcgcttat
gaagaggggcaaacccctaacccttgcgcattgtgcaaccctttaatgaaatttgggtta
gctttagatcacgctttaaaattagggtgtgaaaagatcgctactgggcattatgcgaga
gtcaaagaaattgacaaggtaagttatattcaagaggctttggataaaactaaagatcag
agctattttttatacgctttagagcatgaagttatcgctaaattggtgttccctttaggg
gatttgttaaaaaaggatattaagcctttagccttgaatgcgatgccttttttaggcact
ctagaaacttataaggaatctcaagaaatctgctttgtggaaaaaagctacattgacacc
ttaaaaaagcatgttgaagtggaaaaagagggcgtggtgaaaaacctgcaaggcgaaatc
attggcacgcataagggctatatgcaatacacgattggcaaacgcaaaggctttagcgtt
aaaggcgcgttagagccgcattttgtggtggggattgacgctaaaaagaacgagttaatt
gtgggcaagaaagaagatttagccacccgttttctcaaggctaaaaacaaatctttaacg
aaagattttaaaaatggcgaatatttcatcaaggcccgttacaggagcgtgcctgctaaa
gcgtttgtgagtttgagagatgagatgattgaagtggagtttgaagagcctttttatggc
gtggctaaagggcaagccttagtcgtttataaagatgacatcttgcttggcgggggcgtg
attgtttag
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