Helicobacter pylori oki154: HPOKI154_00090
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Entry
HPOKI154_00090 CDS
T03725
Name
(GenBank) lytic transglycosylase
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
hpye
Helicobacter pylori oki154
Brite
KEGG Orthology (KO) [BR:
hpye00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
hpye01011
]
HPOKI154_00090
Enzymes [BR:
hpye01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HPOKI154_00090
Peptidoglycan biosynthesis and degradation proteins [BR:
hpye01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HPOKI154_00090
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
LysM
LysM3_LYK4_5
LysM1_NFP_LYK
HTH_Mga
DUF928
SLT_2
Motif
Other DBs
NCBI-ProteinID:
AHN38408
LinkDB
All DBs
Position
11726..12850
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AA seq
374 aa
AA seq
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MPKRMKCFSQKWLVFFVTHWLLLASLGHAKMAFESNIDTKALEAFGVNASFLSQMPNALK
KMNKEEEWKKLVKRFDVNYQFIPIIKNMLIEASVPQEFLFLAMAESKFSSRAYSRKKAVG
IWQFMPSTAKELGLKVNHYIDERRDPIKSTQAAITYLKRLYKQTGEWYLVAMAYNYGLRK
VQNAIKVAGTSDIKILLDEDKKYLPKETREYIRSILSLALKFNSLDNLKDKEYLLNRGAR
VSLVGVPFKRHTSLIQVAKNLNLSLETLKSYNHQFRYNILPSKDPTYTIYIPYEKLALFK
QRQLKQNKNIQASPKSPFITHVVLPKETLSSIAKRYQVSISSIQLANNLKDSNIFIRQRL
IIPTNKKLLATREF
NT seq
1125 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaaagaatgaagtgttttagtcaaaaatggttggttttttttgttacccattgg
cttttattggcttctttaggccatgcgaaaatggcttttgaatccaatattgacaccaaa
gcgttagaggcttttggggttaatgcgagctttttgtcccaaatgccaaacgctctaaaa
aagatgaataaagaagaagaatggaaaaagttagtcaaaagatttgatgtgaattaccag
ttcatccccatcattaaaaacatgctgatagaagcgagcgtgccgcaagaatttttattt
ttagccatggcagagtctaaattttcatcaagggcttatagcaggaaaaaagcggtaggg
atttggcaattcatgccaagcacggctaaagaattagggcttaaagtcaaccattacatt
gatgaaagaagagatcccattaaaagcactcaagcggcgatcacttacttgaaacggctc
tacaagcaaaccggggagtggtatttggtcgctatggcgtataattacggcttacgcaag
gttcaaaacgctattaaagtcgccggcacttcggacattaagattttgttagatgaagat
aaaaaatacctccctaaagaaacacgagagtatatccgctccattctaagcttagcgtta
aaattcaacagcctagacaatctcaaagataaagaatacctgctcaatcgtggggcgagg
gtgagtttagtgggcgtcccgtttaaaaggcacacttctttaatccaagtggctaaaaat
ttaaacttgagtttagaaaccttaaaatcttacaaccaccaattccgctataacattctg
ccttctaaagaccccacctacaccatttatatcccttatgaaaaactcgctcttttcaaa
caacgccagctcaaacaaaataaaaacattcaagccagtccaaaaagcccttttatcacc
catgtggtcttgcctaaagaaaccttatcttctatcgctaaacgctatcaagtcagcatt
tccagcatccaattagccaataacctcaaagattctaatatttttatccgccagcgctta
atcatccccaccaacaaaaaattactcgctacaagggaattttaa
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