Helicobacter pylori oki154: HPOKI154_01220
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Entry
HPOKI154_01220 CDS
T03725
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
hpye
Helicobacter pylori oki154
Brite
KEGG Orthology (KO) [BR:
hpye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpye03400
]
HPOKI154_01220
DNA repair and recombination proteins [BR:
hpye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HPOKI154_01220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
Zn_ribbon_LapB
AAA_25
DnaB_C
ChlI
Lon_C
nSTAND_NTPase5
AAA_24
NTPase_1
AAA_14
RecA_N
AAA_16
Rad51
ATPase_2
ABC_tran
NACHT
SLFN-g3_helicase
AAA_31
nSTAND3
AAA_22
CbiA
AAA_5
AAA_30
DAP3
GvpD_P-loop
DUF7129
ArsA_ATPase
NPHP3_N
Zeta_toxin
AAA
SRP54
MeaB
RsgA_GTPase
ResIII
KTI12
zf-C2H2_7th_ZNF462
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AHN38600
LinkDB
All DBs
Position
224209..225555
Genome browser
AA seq
448 aa
AA seq
DB search
MAKKTSLFECQHCGFTSPKWLGKCVQCNSWESFIELNQTQKEVLNTLKNPLPKAQKSVSI
AEIEHEEVIKFSSTQSELDIVLGGGIAKGGLYLVGGSPGVGKSTLLLKVASGLAKNQQKV
LYVSGEESLSQIKMRATRLDCIEKELYLLNEINWPVIKANIESENYFACVIDSIQTLYSP
EISSAPGSISQVREITFELMRLAKTRNIAVFIIGHITKEGSIAGPRVLEHMVDSVLYFEG
DPSRELRILRSFKNRFGPTSEIGLFEMKEQGLVSAKEASSLFFSKEEPMEGSAITITLEG
SRALILEIQALVSECSFGAPKRLANGFDTNRLNMLIALLEKKLEIPLNRHDVFINVSGGI
KISEPACDLAIIASILSSFKNRKIDNKTAFLGEVSLNGRILEAPNLNARLKEMENYGFLK
AILPKKPSQKTSIKCYEANAVGKIVEWM
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
ttggctaaaaaaacttctttatttgagtgtcagcattgcggttttacaagccctaagtgg
ctgggtaagtgcgttcaatgcaactcatgggagagttttatagaattgaatcaaacccaa
aaggaagttttaaacacgcttaaaaacccgctcccaaaagcacaaaaaagcgtttctatc
gctgaaattgagcatgaagaagtgatcaagttttcttccactcaaagcgaattggatatt
gtcttgggtggggggatcgctaaaggagggttgtatttggtgggggggagtcctggggtg
gggaaatccaccctgcttttaaaagtggcttctggcttagccaaaaaccagcaaaaggtt
ttgtatgtgagcggggaagagagcttgagccagattaaaatgcgcgccaccagattggat
tgcatagaaaaagaattgtatctgctcaatgaaatcaattggcctgtgattaaggctaat
attgaaagcgaaaattattttgcttgcgtgatcgattccattcaaacgctttattcgcca
gagatttcttcagcacccggctctatttcgcaagtgcgagagatcacttttgagctcatg
cgtttagccaaaacaagaaatattgctgtttttatcatcggtcatatcactaaagaaggg
agcatcgcagggcctagagtgctagagcatatggtagatagcgtgctgtattttgaaggc
gatcccagtagggaattaaggattttaaggagttttaaaaaccgctttggccctacgagt
gaaatcggcttgtttgaaatgaaagagcagggtttggtgagtgctaaagaagcttcaagc
ttgtttttttccaaagaagagcctatggaagggagcgccattaccatcactttagaaggc
tcaagggcgttgattttagaaattcaggcgttggtgagcgagtgcagtttcggagcgccc
aaacgattagcgaacgggtttgacaccaaccgccttaacatgctcatcgctttattggaa
aaaaagctagaaatccccttaaaccgccatgatgtgtttattaatgtgagcggagggatt
aagattagcgagccggcttgcgatttagcgatcattgccagtatcctttcaagctttaaa
aacagaaaaattgacaataaaacggcgtttttgggcgaagtgagtttgaatggcaggatt
ttagaagcccctaatttgaacgctagattgaaagaaatggaaaattacggctttttaaaa
gccattttgcctaaaaaacccagtcaaaaaacctcgatcaaatgctatgaagccaatgcg
gtggggaagattgttgaatggatgtga
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