Helicobacter pylori oki154: HPOKI154_03325
Help
Entry
HPOKI154_03325 CDS
T03725
Name
(GenBank) family 4 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hpye
Helicobacter pylori oki154
Pathway
hpye03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPOKI154_03325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpye03400
]
HPOKI154_03325
Enzymes [BR:
hpye01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPOKI154_03325
DNA repair and recombination proteins [BR:
hpye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPOKI154_03325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHN38975
LinkDB
All DBs
Position
657848..658438
Genome browser
AA seq
196 aa
AA seq
DB search
MERLLGETYTNTNLTKPQNKPLNKQVYEGIENCNLCKRHQNSKPVIGLFNPTSKLTFITL
TPMLDSQSNFLSNLKAAMLESIIQKVFNCPLKDCSILSLLKCDSNSLNLEEEINACLFHL
TWQLDNSASKVIVVFGEILPKRLLNLSKEESFGRIVSLKTKHFLSTHALEDMLKNPTLKK
EALAHFKIALQFLNQS
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtcttttgggcgaaacttacacgaataccaaccttaccaagccccaaaataag
ccccttaacaaacaagtttatgagggcatagaaaattgcaatctgtgcaaacgccatcaa
aattcaaaaccggtgatcgggctttttaaccccacttccaagctcactttcatcacgcta
acccccatgctagatagccaatcaaatttcttaagcaatttaaaagcggccatgttagag
agcattatccaaaaagtttttaactgccccttaaaagattgcagtattttatcgctcctt
aaatgcgactctaacagccttaatttagaagaagaaatcaacgcatgcctattccattta
acctggcaattagacaacagcgcttcaaaagtcattgtggtatttggcgagattttgccc
aaacgccttttaaacctttctaaagaagaatcctttgggcgcatcgtgtctttaaaaaca
aaacattttttaagcacccatgctttagaggacatgctcaaaaaccccacgctcaaaaaa
gaagcgttagcgcattttaaaatagcgcttcaatttcttaaccagtcttaa
DBGET
integrated database retrieval system
