Helicobacter pylori oki154: HPOKI154_03565
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Entry
HPOKI154_03565 CDS
T03725
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hpye
Helicobacter pylori oki154
Brite
KEGG Orthology (KO) [BR:
hpye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpye03032
]
HPOKI154_03565
03400 DNA repair and recombination proteins [BR:
hpye03400
]
HPOKI154_03565
Enzymes [BR:
hpye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HPOKI154_03565
DNA replication proteins [BR:
hpye03032
]
Prokaryotic type
DNA Topoisomerases
HPOKI154_03565
DNA repair and recombination proteins [BR:
hpye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPOKI154_03565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
AHN39020
LinkDB
All DBs
Position
714254..716740
Genome browser
AA seq
828 aa
AA seq
DB search
MQDNLINETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMHELG
LTSKVAYKKSARIVGDVIGKYHPHGDNAVYNALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPPHRIDEIIDALVHVLENPNAGLDEILEFVKGPDFPTGGIIYGKAGIIEAYKTG
RGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLRLFLNHR
KTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVQLIKTSQSPEAAKNALMERFTLSE
IQSKAILEMRLQRLTGLERDKIKEEYQNLLELIDDLNGILKSEDRLNEVVKTELLEVKEQ
FSSQRRTEIQEVYENIDIEDLIANEPMVVSMSYKGYVKRVDLKAYERQNRGGKGKLSGNT
YEDDFIENFFVANTHDILLFITNKGQLYHLKVYKIPEASRIAMGKAIVNLISLAPDEKIM
ATLSTKDFSDERSLAFFTKNGVVKRTNLSEFGSNRSYSGIRAIVLDEGDELVSAKIVDKN
AKHLLIASYLGIFIKFPLEDVREIGRSARGVRGIKLNENDFVVGAVVINDDSNKLLSVSE
NGLGKQTLAEAYREQSRGGKGIIGMKLTQKTGNLVSVISVDDENLDLMILTASTKMIRVS
IKDIKETIGRNTSGVKLIDTADKVVYANSCPKEEEPENLENPPTPLFE
NT seq
2487 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataatttaatcaatgaaacaaaaaatattgtagaagtggggattgattcttct
attgaagagagctatttagcttattcaatgagcgtgatcatagggcgtgctttaccggac
gctagagatggtttaaagcctgtgcataggcgtattttgtatgcgatgcatgaattaggc
cttacttccaaagtcgcttataaaaaaagcgctaggatcgtgggtgatgtgattggtaaa
taccacccccatggcgataatgcggtttataatgcgctagtgagaatggcgcaagatttt
tctatgcgtttggaattggtggatgggcaaggcaactttggctctattgatggcgataac
gctgcagcgatgcgttacactgaagccagaatgactaaggcgagtgaagaaattttaagg
gatattgataaagacaccattgattttgtgcctaattatgatgacaccttaaaagagccc
gatattttaccaagccgtctgcctaaccttttagtcaatggggctaacgggatcgctgta
gggatggcgacttctatcccccctcacaggattgatgaaatcatagacgctttagtgcat
gtcttagaaaaccctaacgctggattagatgaaattttggaatttgtcaaagggcctgat
tttcccactggcgggatcatttatggcaaggcgggtattattgaagcctataaaacgggg
cgagggcgcgtgaaagtgcgtgccaaagtgcatgtggaaaagacgaaaaataaagaaatc
atcgttttagatgaaatgccttttcaaaccaataaagccaaattagtggaacaaatcagc
gatttagcgcgagaaaaacaaattgaaggcattagtgaagtgcgcgatgagagcgataga
gagggcattagagtggtgattgaattaaaaagagacgcgatgagtgaaattgtcttaaac
cacctttacaaactcaccaccatggagaccacttttagcatcattttactcgctatctat
aataaagagcctaagattttcacgcttttagagttgttgcgccttttcttaaaccacaga
aaaaccattattataagacgcactatttttgaattagagaaggctaaggctagagcgcat
attttagagggctatttgatcgcattagacaatattgatgaaattgtgcaactcattaaa
acaagccaaagtccagaagcagctaaaaacgccttaatggagcgttttactttgagcgaa
atccagagcaaagccattttagaaatgcgtttgcagcgcttaacaggccttgaaagagat
aaaatcaaagaagaataccaaaacttgctagagcttattgatgatctcaatggcatttta
aagagcgaagatcgcttgaatgaggtcgtcaaaacagagcttttagaagtcaaagagcaa
ttttcttctcaaaggcgcactgaaattcaagaagtttatgaaaatattgacatagaagat
ttgatcgctaatgagcctatggtggtgagcatgagctataaaggctatgtgaaaagagtg
gatttaaaagcttatgaaaggcaaaatcgtggcggtaagggcaagctttcaggcaacact
tatgaagacgatttcattgaaaacttttttgtggctaacacgcatgatattttgctcttt
atcaccaataaggggcaattgtatcatttgaaagtctataagatcccagaagcgagccgg
atcgctatgggtaaagccatcgtgaatttaatctcgctcgctcctgatgaaaagatcatg
gcaactctaagcaccaaagactttagcgatgaacgctctttagctttcttcaccaaaaat
ggtgtggtgaagcgcaccaatttgagcgaatttggtagcaataggagttatagcggtatc
agagcgattgttttagatgaaggcgatgaattggtgagcgcaaaaattgtggataaaaac
gccaagcatttgctcatcgcatcttatttgggcattttcattaaattccctttagaagat
gtgcgcgagatcggaagaagtgctcgtggggttagagggattaaactgaatgaaaatgat
tttgttgtcggtgcggtcgttattaatgatgacagcaacaagcttttgagcgtgagtgaa
aacgggcttggcaaacaaactttagccgaagcgtatagagagcaatctcgtggaggtaag
gggatcattggcatgaagctcactcaaaaaaccggcaatctggtgagcgttatcagtgtg
gatgatgaaaacctggatttgatgatccttactgcaagcacgaaaatgatcagagtttct
attaaagatattaaagaaaccatcggaagaaatactagtggggtaaaactcatagacacc
gccgataaagtcgtgtatgccaattcttgccctaaagaagaagagccagaaaatttagaa
aaccctcctacaccattgtttgagtga
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