Helicobacter pylori oki154: HPOKI154_04270
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Entry
HPOKI154_04270 CDS
T03725
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
hpye
Helicobacter pylori oki154
Brite
KEGG Orthology (KO) [BR:
hpye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpye03032
]
HPOKI154_04270
03036 Chromosome and associated proteins [BR:
hpye03036
]
HPOKI154_04270
03400 DNA repair and recombination proteins [BR:
hpye03400
]
HPOKI154_04270
DNA replication proteins [BR:
hpye03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HPOKI154_04270
Chromosome and associated proteins [BR:
hpye03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HPOKI154_04270
DNA repair and recombination proteins [BR:
hpye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HPOKI154_04270
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
DUF2267
HU-CCDC81_bac_2
HU-CCDC81_euk_1
23S_rRNA_IVP
HU-CCDC81_euk_2
DUF2880
Motif
Other DBs
NCBI-ProteinID:
AHN39146
LinkDB
All DBs
Position
849698..850087
Genome browser
AA seq
129 aa
AA seq
DB search
MLDLSLGFDYNYRSISQAKRSNRLVLASIRKGVIHMNKAEFIDLVKEAGKYNSKREAEEA
ISAFILAVETALSKGESVELVGFGKFETAEQKGKEGKVPGSDKTYKTEDKRVPKFKPGKI
LKQKVEEGK
NT seq
390 nt
NT seq
+upstream
nt +downstream
nt
ttgcttgatttatctttaggatttgattataattaccgctcaatcagtcaagctaagcga
tcaaatcgcttggttttggcatctattagaaaaggggttatccacatgaacaaagcggaa
tttattgatttggttaaagaagcgggcaaatacaacagcaaaagagaagccgaagaagcg
atcagtgcctttattctagcggtagaaacagctttaagcaagggtgagagcgtagagttg
gttggttttggcaaatttgagaccgcagagcaaaaaggcaaagaaggtaaagtgccagga
agcgataaaacttataaaactgaagacaagcgagtgcccaaattcaaacccggcaaaatc
cttaaacaaaaagttgaagaaggcaaataa
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