Helicobacter pylori oki154: HPOKI154_04705
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Entry
HPOKI154_04705 CDS
T03725
Name
(GenBank) tRNA pseudouridine synthase D
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
hpye
Helicobacter pylori oki154
Brite
KEGG Orthology (KO) [BR:
hpye00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpye03016
]
HPOKI154_04705
Enzymes [BR:
hpye01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
HPOKI154_04705
Transfer RNA biogenesis [BR:
hpye03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPOKI154_04705
Prokaryotic type
HPOKI154_04705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
AHN39221
LinkDB
All DBs
Position
948530..949675
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AA seq
381 aa
AA seq
DB search
MNLNFMPLLHAYNHANIDFHFNSSARDFCVHEVPLYEFSNTGEHAVIQVRKSGLSTLEML
QIFSQILGVRIAELGYAGLKDKNALTTQFISLPKKYAPLLEKNTHNLQERNLKILSLNYH
HNKIKLGHLKGNRFFMRFKKMTLLNAQKTEQVLEQIVQFGMPNYFGPQRFGKFNNNHQEG
LKILQNQTKFAHQKLNAFLISSYQSYLFNSLLSKRLEISKIISAFSVKENLEFFKQKNLS
VNPNTLKALKNQAHPFKILEGDVMCHYPYGKFFDALELEKESERFLKKEAAPTGLLDGKK
ALYAKNLSLEIEKEFQHNLLNSHAKTLGSRRFFWVFVENVTSQYVKEKAQFELGFYLPKG
SYASALLKEIKHEKGENNDEF
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaatttaaattttatgcccctattgcatgcttataaccatgcgaacattgattttcat
ttcaattctagcgctagggatttttgcgtgcatgaagtgcctttgtatgagtttagtaac
acaggcgaacatgccgttattcaagtgagaaaaagcggtttaagcactttagaaatgctt
cagattttttctcaaattttaggggtaagaatcgctgaattgggttatgcgggcttgaaa
gataaaaacgcactgacgactcaattcatctcactccctaaaaaatacgcccctttatta
gaaaaaaatacgcataatttgcaagaaagaaaccttaaaatcctgtctttgaattaccac
cataataaaatcaaattagggcatttgaaagggaatcgcttttttatgcgttttaaaaaa
atgaccctcctaaacgctcaaaaaactgaacaagttttagaacaaatcgttcagtttggc
atgcctaattattttggcccgcaacgctttgggaagttcaataacaaccaccaagagggt
ttaaaaatcttgcaaaatcaaacgaaattcgcccatcaaaaattaaacgcttttttaatt
tcaagctatcaaagttatttgtttaactcgcttttaagcaaacgattagaaatcagtaaa
atcattagcgcttttagtgtcaaagaaaatttagaattttttaaacaaaaaaatttaagc
gttaatccaaacaccctaaaagcccttaaaaaccaagcccacccctttaaaatcttagaa
ggcgatgtgatgtgtcattacccttatgggaagttttttgacgctttagaattagaaaaa
gagagcgaaaggtttttgaaaaaagaagctgcacctaccgggttattagatggcaaaaag
gctctttatgcaaaaaatttgagtttagaaattgaaaaagaattccagcataacctttta
aatagccatgctaaaacgctaggatctaggcggtttttttgggtgtttgtagaaaatgta
acttctcaatatgtgaaagaaaaagcgcaatttgaattgggattttacttgcctaagggg
agttatgcgagcgcgttgctcaaagaaatcaagcatgagaaaggagaaaataatgacgaa
ttttga
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