Helicobacter pylori oki154: HPOKI154_05305
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Entry
HPOKI154_05305 CDS
T03725
Name
(GenBank) DEAD/DEAH box helicase
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
hpye
Helicobacter pylori oki154
Pathway
hpye03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPOKI154_05305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpye03400
]
HPOKI154_05305
Enzymes [BR:
hpye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPOKI154_05305
DNA repair and recombination proteins [BR:
hpye03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HPOKI154_05305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
ResIII
PriA_C
Helicase_C
Zn_ribbon_PriA
PriA_3primeBD
AAA_22
AAA_19
ADDB_N
nSTAND3
PhoH
AAA_7
AAA_30
zf-C3HC4_3
Motif
Other DBs
NCBI-ProteinID:
AHN39308
LinkDB
All DBs
Position
complement(1070556..1072415)
Genome browser
AA seq
619 aa
AA seq
DB search
MFYHLIAPLKNKTPPLTYFSKERHQKGALVNIPLRNKTLLGVVLEEVSKPSFECLELEKT
PYFLLPFQIELATFVAQYYSANLSSVLSLFTPFKECDLVGLEKIEPVLNALSQTQTNALK
ELQKHSASLLFGDTGSGKTEIYMHSIAQTLEQKKSALLLVPEIALTPQMQQRLKRVFKEN
LGLWHSKLFQTQKKQFLERLYSQEIKLVVGTRSALFLPLKELGLIIVDEEHDFSYKSHQS
PMYNARDLCLYLSHKFPIQVILGSATPSLNSYKRFKDKALVRLKGRYTPTQKNIIFEKTE
RFITPKLLEVLKQVIDKNEQAIIFVPTRANFKTLLCQNCYKSVQCPFCSVNMSLHLKTHK
LMCHYCHFSNPIPKTCSACQSEVLVGKRIGTMQVLNELEGLLKGAKIAILDKDHTSTPKK
LHNILNDFNAQKTNILIGTQMISKGHDYAKVSLAVVLGIDNIIKSNSYRALEEGVSLLYQ
IAGRSARQISGQVFIQSTETDLLENFLEDYEDFLQYELQERCELYPPFSRLCLLEFKHKN
EEKAQQLSLKASQTLSSCLEKGVTLSSFKAPIEKIASSYRYLILLRSKNPLSLIKSVHAF
LKTAPNIPCSVNMDPVDIF
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atgttctatcacttaatcgctcctttaaaaaataaaaccccccctttaacttacttttct
aaggagcggcaccaaaaaggagcgttagtcaatatccctttaaggaataaaacgcttttg
ggcgtcgttcttgaagaagtttcaaaaccctcttttgaatgcctagaactggaaaaaacc
ccttattttttactcccctttcaaatagaactcgctacttttgttgctcaatattactcg
gccaatctttcttcagtcttaagcctttttaccccttttaaagaatgcgatttggtgggg
ttagaaaaaattgagcctgttcttaatgcgttaagccaaacgcaaacaaacgctttaaaa
gaattgcaaaaacattcagcaagcttgctttttggcgatacgggtagcgggaaaaccgag
atttatatgcattcaatcgctcaaactttagagcaaaaaaaaagcgctttattgttagtg
ccagaaatcgctctcacccctcaaatgcaacaacgccttaaaagggtttttaaagaaaat
ttaggcttgtggcatagcaaactctttcaaacccaaaaaaaacaatttttagaaaggctt
tattcgcaagaaatcaaattagtggtaggcacacgaagcgcgttgtttttaccccttaag
gagttgggtttaatcattgtagatgaagagcatgacttttcttataaatcccatcaaagc
cccatgtataacgctagggatttatgcttgtatttatcccataaattccctattcaagtg
attttaggctctgctacgccaagtttaaatagttacaaacgctttaaagataaggcttta
gtgcgcttaaaggggcgctacacccctacgcaaaaaaacattatttttgaaaaaaccgag
cgttttatcacgcccaaactcctagaagtgctaaaacaagttatagacaaaaacgagcaa
gccattatttttgtgcctacaagggctaatttcaaaaccttgctgtgtcaaaattgctat
aaaagcgttcaatgccccttttgcagcgtgaatatgagtttgcatttaaaaacccacaaa
ctcatgtgccattattgccatttttcaaaccctatccctaaaacttgcagcgcgtgtcaa
agcgaggttttagtgggtaaaaggataggaaccatgcaagtgttgaacgagttggaaggc
cttttgaaaggcgctaaaatagccattttagataaagatcataccagcacgccaaaaaaa
ctccacaatattttaaacgatttcaacgctcaaaaaaccaatatcttaatcggcactcaa
atgataagcaaagggcatgattacgctaaagtgagtttagcggttgttttaggcatagac
aatatcattaaatctaatagttacagggctttagaagaaggcgtgtcgttactttatcaa
atcgctgggaggagcgctaggcaaatttctggccaagtgttcattcaaagcaccgaaacg
gatctattagaaaattttttagaagattatgaagattttttacaatacgaattgcaagaa
aggtgcgaactctacccgcctttttcaaggctgtgtttgttagaatttaagcataaaaac
gaagaaaaagcccaacaattgagcctaaaagcctctcaaaccctttcttcgtgtttagaa
aagggcgtaacgctctctagctttaaagcccccattgaaaaaatcgcttcttcttatcgc
taccttattttattgcgttccaaaaaccctttaagcctaatcaaaagcgtgcatgcgttt
ttaaaaaccgctcctaatatcccttgcagcgtgaatatggatcctgtggatattttttaa
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