Helicobacter pylori oki154: HPOKI154_06545
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Entry
HPOKI154_06545 CDS
T03725
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
hpye
Helicobacter pylori oki154
Pathway
hpye03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hpye00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HPOKI154_06545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpye03021
]
HPOKI154_06545
03400 DNA repair and recombination proteins [BR:
hpye03400
]
HPOKI154_06545
Enzymes [BR:
hpye01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HPOKI154_06545
Transcription machinery [BR:
hpye03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HPOKI154_06545
DNA repair and recombination proteins [BR:
hpye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HPOKI154_06545
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
Enkurin
Myb_DNA-bind_4
Motif
Other DBs
NCBI-ProteinID:
AHN39530
LinkDB
All DBs
Position
complement(1311962..1312996)
Genome browser
AA seq
344 aa
AA seq
DB search
MKVIKTAPLIPSEIKVLEKEGNRVKISLAPFEFGYAVTLAHPIRRLLLLSSVGYAPVGLK
IEGVHHEFDSLRGVTEDVSLFIMNLKNIRFIAKALVGQDSSLENQSVVVDYSFKGPMELR
ARDLSSEHIEIVNPEMPLATINEDAQLNFSLIIYKGMGYVPSENTRELMPEGYMPLDGSF
TPIKNVVYEIENVLVEGDPNYEKIIFDIETDGQIDPYKAFLSAVKVMGKQLGVFGERPIT
NTEYSGDYAQRDDAKDLSAKIESMNLSARCFNCLDKIGIKYVGELVLMSEEELKGVKNMG
KKSYDEIAEKLNDLGYPVGTELSPEQRESLKKRLEKLEDKGGND
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttatcaaaacagcacctttgatcccatcagaaattaaggtgttagagaaagag
ggcaatcgggttaagatttctctggctccatttgagtttggttacgctgttacgctcgct
catcctattagaaggcttttgcttttaagctctgtggggtatgctcctgtaggtttaaag
attgaaggcgtccatcatgagtttgactcattaaggggggttactgaagatgtgtcgctt
ttcatcatgaatttaaagaatatccgctttatagccaaggcgttagtggggcaagatagc
tctttagaaaaccaatcggttgtggtggattattcttttaaagggcctatggagcttagg
gctagggatttgagttctgagcatatagaaatcgtcaatcctgaaatgcccctagccaca
atcaacgaagacgctcaattgaatttttcgctcattatctataaaggaatggggtatgtc
ccaagcgaaaacacaagggaattgatgcctgagggctacatgccactagacggctctttc
acgccgattaaaaatgtcgtttatgagattgaaaatgttttggttgagggcgatcccaat
tatgaaaaaatcatttttgatattgaaacagacgggcagattgacccttataaagcgttt
ttatcagcggtgaaagtgatgggcaagcaactgggcgtttttggcgaaagacccattact
aatacggagtattcaggcgattacgctcaaagagatgacgctaaagatttgagcgctaag
attgaaagcatgaatttgagcgctaggtgttttaattgcttggataaaatcggcatcaag
tatgtgggcgagctcgtgttgatgagcgaagaagagcttaagggcgtgaaaaacatgggt
aaaaaatcctatgatgaaatcgctgaaaaattgaatgatttgggctatccggtaggcaca
gaattaagccctgaacaaagagagagtttaaagaaaagattagaaaaattagaagataaa
ggaggtaacgactga
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