Helicobacter pylori oki154: HPOKI154_07395
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Entry
HPOKI154_07395 CDS
T03725
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpye
Helicobacter pylori oki154
Pathway
hpye03420
Nucleotide excision repair
hpye03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPOKI154_07395
03430 Mismatch repair
HPOKI154_07395
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpye03400
]
HPOKI154_07395
Enzymes [BR:
hpye01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPOKI154_07395
DNA repair and recombination proteins [BR:
hpye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPOKI154_07395
MMR (mismatch excision repair)
Other MMR factors
HPOKI154_07395
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
PcrA_UvrD_tudor
Motif
Other DBs
NCBI-ProteinID:
AHN39674
LinkDB
All DBs
Position
complement(1461580..1463625)
Genome browser
AA seq
681 aa
AA seq
DB search
MDFEKSILNNLNEAQKIAASHIQGPLLILAGAGSGKTKTLTSRLAYLIGACGVPSENTLT
LTFTNKASKEMQERALKLLKNQTLIPPLLCTFHRFGLLFLRQHMSLLKRACDFSVLDSDE
VKTLCKQLKISSFRASISQIKNGMIDLSMQDSECYKAYELYQNALKKDNLVDFDDLLFLS
LKILQDNETIAKETSERYHYIMVDEYQDTNALQLEFLKKLSFTHHNLCVVGDDDQSIYGF
RGADISNILNFSKHFKGAKVVKLETNYRSSAEILACANSLISHNQHRHKKTLQSFKGSHK
SVVCKEYLTQKEESLDVAYQIKALLKKGENLENIAILYRLNGLSRSIEESLNALNIPYRL
IGAVSFYERAEVKDALAFMHLVAKKDDRFFIRRVLNKPSRGLGKITQEWIFSLLDGEDLN
LEEALKLGVFKGKLNPKNEYALNKFIAMIGRLREAFEISVEEFCARFLEETNLLKSYEKE
DNYEEREGFVKELLALVKEHFKTNPTHSLLDFLNESVLDTHNTENAQKVSCMSVHMSKGL
EFKHVFVIGLEEGFFPHRGFNQESDLEEERRLAYVAITRAKEGLQLSYVQERSYFGRKIS
CSPSVFLEEAKLLKQDNPPKQDHKKDAPIKVGDLIRHKLFGTGRVLGVEKGLSGLCLKIN
CGGNVYDKISAKFVEKVDNGF
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atggattttgaaaaaagcattttaaataatttaaacgaagcgcaaaaaatcgccgcaagc
cacattcaagggcctttattgattttagcgggagcagggagcggtaagactaagacttta
acgagccgtttagcgtatttgattggcgcttgtggcgtgcctagcgagaacactttaacg
ctcactttcaccaataaagcgagcaaagaaatgcaagaaagggctttgaaattattgaaa
aaccaaacccttatcccccccttgctttgcactttccatcgttttggtttgctgttttta
aggcaacacatgagccttttaaaaagagcgtgcgatttttcggtgttagacagcgatgaa
gtgaaaacgctgtgcaaacagctcaaaatttcaagctttagagccagtatttctcaaatc
aaaaacggcatgattgatttgagcatgcaagatagcgaatgttataaagcgtatgagctt
tatcaaaacgcgcttaaaaaagacaatttagtggattttgacgatttgctttttttaagc
cttaagattttacaagataatgaaaccatcgccaaagaaactagcgagcgctaccattac
attatggtagatgagtatcaagacacgaacgccttgcaattagaatttttaaaaaaattg
agtttcacgcaccataatttgtgcgtggtgggcgatgacgatcagagcatttatggtttt
aggggggctgatatttctaacattttaaatttttccaagcattttaaaggggctaaggtg
gtgaaattagaaaccaactaccgctccagcgctgaaattttagcgtgcgctaactccctg
attagccataaccaacaccgccacaaaaaaacgcttcaaagttttaaaggctcgcataaa
agcgtggtttgtaaagaatatttgacgcaaaaagaagagagcctagatgtggcttatcaa
atcaaagcccttttaaagaagggcgaaaatttagaaaatatcgctattttgtatcgctta
aacgggcttagccgcagcattgaagagagcttgaacgctttgaatatcccctataggctt
attggggcggtgagtttctatgaaagagcagaggttaaagacgctttggcgttcatgcat
ttagtggctaaaaaagacgatcgcttttttatcaggcgcgttttaaacaagccttcaaga
ggacttggcaagatcactcaagaatggattttttctcttttagatggtgaggatttgaat
ttagaagaagcgctaaaacttggggtgtttaaaggcaaattaaaccctaaaaacgaatac
gccttgaataaatttatcgctatgatagggcgtttgagggaggcttttgaaatttcagta
gaggagttttgcgctcggtttttagaagaaaccaaccttttaaaaagctatgaaaaagaa
gacaattacgaagaaagagagggctttgttaaagagcttttagctttagtgaaagagcat
tttaaaactaaccccacgcattctttattggattttttgaatgaaagcgttctagatacc
cataatacagaaaacgcgcaaaaagtgagttgcatgagcgtgcatatgagtaagggatta
gagtttaagcatgtgtttgtgatcgggttagaagaagggtttttcccgcataggggattc
aatcaagaaagcgatttagaagaagaaaggcgcttggcttacgtagcgatcactagggct
aaagaaggattgcagctctcttatgttcaagagcgttcgtattttgggaggaaaatttct
tgctcgccctctgtgtttttagaagaggccaagttgctcaaacaagacaacccccctaaa
caggatcacaaaaaagatgcgcccattaaagtgggggatttgatcaggcataaacttttt
ggcaccggtagggttttaggcgtagaaaaaggcttgagcggtttgtgcttgaagatcaat
tgcggagggaatgtctatgataaaatctcagcaaaatttgtagaaaaagtggataacggg
ttttga
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