Helicobacter pylori oki154: HPOKI154_07760
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Entry
HPOKI154_07760 CDS
T03725
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpye
Helicobacter pylori oki154
Pathway
hpye03030
DNA replication
hpye03430
Mismatch repair
hpye03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpye00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPOKI154_07760
03430 Mismatch repair
HPOKI154_07760
03440 Homologous recombination
HPOKI154_07760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpye03032
]
HPOKI154_07760
03400 DNA repair and recombination proteins [BR:
hpye03400
]
HPOKI154_07760
Enzymes [BR:
hpye01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPOKI154_07760
DNA replication proteins [BR:
hpye03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPOKI154_07760
DNA repair and recombination proteins [BR:
hpye03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPOKI154_07760
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AHN39737
LinkDB
All DBs
Position
complement(1547454..1548425)
Genome browser
AA seq
323 aa
AA seq
DB search
MIKISLNSNKWAWMWWFQGVIFLNLKIVSWLLKAYRMSDSLLHKDIQALIARLKHQDLSL
GMLEKSLSRLIYDEVNLEYLKACGLNFVETSENLITLKNLKTPLKDEVFSFIDLETTGSC
PLKHEILEIGAVQVRGGEIINRFETLVKVKSVPDFIAELTGITHEDTLNAPSAHEALQEL
RLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNLKLCTLDLSKRAILSMRYSLSFLKE
LLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKTTMDLIDFSKCANTLIKRPPRARHQ
ETLPPFSLFERTKGLLNIIKATS
NT seq
972 nt
NT seq
+upstream
nt +downstream
nt
atgataaaaatatctttgaactccaacaagtgggcgtggatgtggtggtttcagggagtt
atatttttaaatctaaagatcgtaagctggctattgaaggcttacagaatgtcagacagc
ctcttgcataaagatattcaagccctaatcgctcgcttaaaacaccaggatttaagcttg
ggcatgctagaaaaatcgctctctcgccttatttatgatgaagtcaatttggaatattta
aaagcgtgcgggcttaatttcgtagaaacgagcgaaaatttaatcacactcaagaacctt
aaaaccccccttaaagatgaggttttttcctttattgatttagaaaccaccggctcttgc
cccctaaagcatgagattttagaaatcggagccgtgcaagtgagggggggggaaatcatc
aatcgttttgaaacccttgtgaaagtcaaaagcgttcctgattttatcgctgagcttaca
ggcatcactcatgaagacaccctaaacgccccaagcgcgcatgaagctttgcaagaattg
cggctttttttaggcaatagcgtgtttgtagcccataacgctaattttgattacaacttt
ttagggcgttattttgtagaaaaattgcattgccccttattgaatttaaagctttgcact
ttggatttatccaaacgggccattttatccatgcgttattctttgagctttttaaaagag
cttttagggtttggtatagaagtcagccatagagcctatgcggacgctttagcgagctat
aagctctttgaaatatgcttattaaacttgcccagttacatcaaaacgacaatggatttg
attgatttttccaaatgcgctaacactttgatcaaaagacccccaagagccagacaccaa
gagactctaccgccattttctctttttgagaggacaaagggtttgttaaatatcataaaa
gcaaccagttaa
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