Helicobacter pylori oki422: HPOKI422_01000
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Entry
HPOKI422_01000 CDS
T03726
Name
(GenBank) 2-hydroxyacid dehydrogenase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
hpyf
Helicobacter pylori oki422
Pathway
hpyf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpyf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPOKI422_01000
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyf03400
]
HPOKI422_01000
Enzymes [BR:
hpyf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
HPOKI422_01000
DNA repair and recombination proteins [BR:
hpyf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPOKI422_01000
Prokaryotic type
HPOKI422_01000
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH
NUDIX_4
HHH_5
EndIII_4Fe-2S
Motif
Other DBs
NCBI-ProteinID:
AHN39992
LinkDB
All DBs
Position
complement(199766..200752)
Genome browser
AA seq
328 aa
AA seq
DB search
METLHNALLKWYEEFGRKGLPFRNLKGINAPYEVYISEVMSQQTQINTVIERFYSPFLEA
FPTLKDLANAQLEEVLLLWRGLGYYSRAKNLKKSAEICVKEHNSQLPNDYQGLLKLPGIG
AYTANAILCFGFREKSACVDANIKRVLLRLFGLDPNIHAKDLQIKANDFLNLNESFNHNQ
ALIDLGALICSPKPKCAICPFNPYCLGKNHLEKHTLKKKQAIIQEERYLGVVVQNNQIAL
EKIEQKLYLGMHHFPDLKENLEYKLPFLGTIKHSHTKFKLNLNLYSAAIKDLKSPVRFYS
LKDLETLPISSMTLKILNFLKQKNLFGG
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
ttggaaactttacacaacgcccttttaaaatggtatgaagaatttgggcgcaaaggttta
ccttttaggaatttaaagggcattaacgctccttatgaagtctatatcagcgaagtgatg
agccaacaaacccaaatcaacacggtaattgagcgtttttattccccttttttagaagct
ttccccactttaaaagacttagcgaacgctcaattagaggaggttttattgctttggaga
gggcttggctattattcaagggctaaaaatttaaaaaaaagcgctgaaatttgcgttaaa
gaacataactcacaattacccaatgattatcaaggcctattgaaactcccaggaattggt
gcatacacggctaatgcgatcttgtgttttggctttagagaaaagagcgcatgcgtggat
gctaatattaaacgagtgcttttaaggctttttggtttggatcctaatatccacgctaaa
gacttacaaattaaggcgaatgactttctcaatcttaatgaaagctttaatcataaccaa
gccctaattgatctaggggctttaatctgctcccctaaacccaaatgtgcgatttgccct
ttcaatccttattgtttaggtaaaaaccacctagaaaaacacacgcttaagaaaaaacaa
gcaatcattcaagaagagcgttacttgggcgttgtggtccaaaataaccaaatcgcttta
gaaaaaatagagcaaaaactctatttggggatgcaccatttccccgacttaaaagaaaat
ttagaatacaaactcccctttttaggcaccatcaaacacagccacactaaattcaagctc
aatttaaacctctattcagctgcaataaaggatctaaaaagccccgttcgtttttatagc
cttaaagacttagaaactttacccataagctctatgacgcttaaaatcttgaatttttta
aaacaaaaaaatttatttgggggttaa
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