KEGG   Helicobacter pylori oki422: HPOKI422_02370
Entry
HPOKI422_02370    CDS       T03726                                 
Name
(GenBank) RNA polymerase sigma 70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
hpyf  Helicobacter pylori oki422
Pathway
hpyf02020  Two-component system
hpyf02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:hpyf00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    HPOKI422_02370
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    HPOKI422_02370
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hpyf03021]
    HPOKI422_02370
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:hpyf02035]
    HPOKI422_02370
Transcription machinery [BR:hpyf03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     HPOKI422_02370
Bacterial motility proteins [BR:hpyf02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    HPOKI422_02370
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 UPF0122 Microp_apicomplexa_17 MarR MarR_2 TetR_C_44 KORA HTH_34 HTH_10 DUF4202 DUF7440
Other DBs
NCBI-ProteinID: AHN40243
LinkDB
Position
467544..468311
AA seq 255 aa
MILMMENRMPKEIQKTETSEKNIEKVLNAYDKQQHHHQDALAIQYLPAVRAMAFRLKERL
PSSIDFNDLVSIGTEELIKLARRYESALSDSFWGYAKTRVNGAMLDYLRSLDVISRSNRK
LIKSIDIEITKHLNEHGKEPSDAYLAQTLGENIEKIREAKTASDIYALVPIDEQFNAIEQ
DEITKKIEAEELLEHVQKALNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQIIK
EVIKKVRKSLGVDHG
NT seq 768 nt   +upstreamnt  +downstreamnt
atgattttgatgatggaaaatagaatgcccaaagaaattcaaaaaactgaaaccagcgaa
aaaaatatagaaaaggttttgaacgcctatgataagcaacaacaccaccatcaagacgcg
ctcgctatccagtatctaccggccgtgcgcgcgatggcgtttcgtttaaaagagcgcttg
cccagctctattgattttaacgatctggtttctattggcactgaagaattgattaaatta
gccaggcgttatgagagcgcgttaagcgattctttttgggggtatgctaaaactcgtgtc
aatggggcgatgctagattatttgcgttctttagatgtgatttctcgctctaatagaaag
ctcattaaaagcattgatattgaaatcaccaaacaccttaatgagcatgggaaagagcct
agcgatgcgtatttagcgcaaactttaggcgaaaatattgaaaagattagagaagccaaa
acggcttcagatatttatgcgttagtgccaatagatgagcaattcaatgcgattgagcaa
gatgaaatcactaaaaagattgaagcagaagagttgttagagcatgtccaaaaagcgttg
aatcaaatgagcgaacgagagcaaatccttatccagctttattactttgaagagttgaat
ttgagcgagatcaaagagattttaggcattactgaatcgcgcatttctcaaatcattaaa
gaagtgattaaaaaggtgcgtaaatccttaggagtggatcatggctga

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