Helicobacter pylori oki422: HPOKI422_03450
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Entry
HPOKI422_03450 CDS
T03726
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hpyf
Helicobacter pylori oki422
Pathway
hpyf03030
DNA replication
hpyf03430
Mismatch repair
hpyf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPOKI422_03450
03430 Mismatch repair
HPOKI422_03450
03440 Homologous recombination
HPOKI422_03450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyf03032
]
HPOKI422_03450
03400 DNA repair and recombination proteins [BR:
hpyf03400
]
HPOKI422_03450
Enzymes [BR:
hpyf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPOKI422_03450
DNA replication proteins [BR:
hpyf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPOKI422_03450
DNA repair and recombination proteins [BR:
hpyf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPOKI422_03450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_14
RCF1-5-like_lid
AAA_5
DNA_pol3_gamma3
EH_Signature
Atrophin-1
AAA_30
DEAD
AAA_assoc_2
AAA_19
Motif
Other DBs
NCBI-ProteinID:
AHN40444
LinkDB
All DBs
Position
678657..680441
Genome browser
AA seq
594 aa
AA seq
DB search
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCEEGPKAVPCDTCIQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VISHLKTILEKEQVSYETSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRSVLEDFFQSLINQDEARLQERYAILENYETESVLEEMMLFLKAKLLSPDSYSILLI
ERFFKIIMSSLSLLKEGANASFVLLLLKMKFKEALKLKALDDAILELEQSKESVLKPLNQ
NANAPKQEPKSAEKIEKPEKRENTETQQTPMLSAKDRIFHNLFKQVQTLVYERNYGLGAV
FEKNIRFIDFDSQTKTLTWESLATDKDKELLRERFKIVKSIVDGVFGKGENIKIALKHHL
ENKSAREETKEIKDFKISSLREKILPKPTTETTAETKEKEVQKNEIKEKEIKEKEIKEKE
IKEKEIKEKEIKEKEIKEIQPKEAPTALQEFMANHSNLIEEIKSEFEIKSVELL
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgcaagttttagcgttaaaataccgccccaaacattttagcgagttagtcggtcaagag
agcgtggctaaaacgctttctttagccctagacaaccagcgtttggctaacgcttattta
ttcagcgggttaagaggttcgggtaaaaccagctcttctaggatttttgctagggctttg
atgtgtgaagaagggccaaaggctgtgccttgcgatacttgcatccaatgccagagcgct
ttaaacaaccaccacatagatattatagaaatggatggggcgtctaatagggggattgat
gatgtccgtaatctcatagagcaaacgcgctacaaaccaagctttgggcgctataaaatc
tttatcattgatgaagtgcatatgttcaccaccgaagcgtttaacgcgcttttaaagact
ttagaagagcctcctagccatgtgaaattccttttagcgacaacggacgccttgaaattg
cccgctaccatactcagccgcacccagcatttccggtttaaaaaaatccctgaaaattcc
gttatttctcatttaaaaactattttagaaaaagaacaagtgagctatgaaacaagcgcg
ttagaaaaactggctcacagcgggcaagggagcttgagggatacgatcactcttttagaa
caagccatcaattattgcgataacgctatcacagaaagcaaagtggctgaaatgttagga
gcgattgacaggagtgttttagaagatttttttcaaagcctaatcaaccaagatgaagcg
cgattgcaagagcgttatgccattttagaaaattatgaaaccgagagcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgattcgtattccatccttttgata
gagcgcttttttaaaatcattatgagcagtttgagccttttgaaagaaggggcaaatgcc
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttgaaactcaaagcccta
gatgatgcgattttggaattagagcaaagtaaagaaagtgttttaaaacccttaaaccaa
aacgctaacgctcctaaacaagaacccaaaagcgcagaaaaaatagaaaagccagaaaaa
agagaaaacacagaaacccagcaaactcccatgctttcagctaaagatcgcatttttcac
aaccttttcaaacaagttcaaacattggtttatgagcgcaattatgggttaggggcggtg
tttgaaaaaaatatccgtttcattgattttgacagccagactaaaaccttgacttgggag
tctttagccactgataaagataaagagcttttaagagaacgatttaaaatcgtgaaaagt
atcgttgatggggtttttggcaagggcgaaaatatcaaaatcgctttaaaacatcatttg
gaaaataaaagtgctagagaagaaactaaagagattaaggattttaaaatttcttcttta
agggaaaaaatcttacccaaaccaaccaccgaaaccacggctgaaactaaagaaaaagag
gttcaaaaaaacgagattaaagaaaaagaaattaaagaaaaagagattaaagaaaaagag
attaaagaaaaagagattaaagaaaaagagattaaagaaaaagagattaaagaaatccaa
cccaaagaagcccctacagccttgcaagaattcatggctaaccattctaatctcattgaa
gagattaagagcgagtttgaaatcaaaagcgtggaattgttatga
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