Helicobacter pylori oki422: HPOKI422_03520
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Entry
HPOKI422_03520 CDS
T03726
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
hpyf
Helicobacter pylori oki422
Brite
KEGG Orthology (KO) [BR:
hpyf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyf03032
]
HPOKI422_03520
03400 DNA repair and recombination proteins [BR:
hpyf03400
]
HPOKI422_03520
Enzymes [BR:
hpyf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HPOKI422_03520
DNA replication proteins [BR:
hpyf03032
]
Prokaryotic type
DNA Topoisomerases
HPOKI422_03520
DNA repair and recombination proteins [BR:
hpyf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPOKI422_03520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Retrotran_gag_2
Motif
Other DBs
NCBI-ProteinID:
AHN40457
LinkDB
All DBs
Position
complement(695817..698312)
Genome browser
AA seq
831 aa
AA seq
DB search
MQDNSVQDNSVNETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYA
MHELGLTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDFSMRLELVDGQGNFGS
IDGDNAAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGA
NGIAVGMATSIPPHRIDEIIDALAHVLENPNAELDEILEFVKGPDFPTGGIIYGKAGIIE
AYKTGRGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVR
DESDREGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLRL
FLNHRKTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVQLIKTSQSPETAKNALMER
FTLSEIQSKAILEMRLQRLTGLERDKIKEEYQNLLELIDDLNGILKSEERLNGVVKTELL
EVKEQFSSPRRTEIQESYENIDIEDLIANEPMVVSMSYKGYVKRVDLKAYEKQNRGGKGK
LSGSTYEDDFIENFFVANTHDILLFITNKGQLYHLKVYKIPEASRIAMGKAIVNLISLAP
DEKIMATLSTKDFSDERSLAFFTKNGVVKRTNLSEFGSNRSCGVRAIVLDEGDELVSAKV
VDKNAKHLLIASHLGIFIKFPLEDVREMGRNARGVIGIRLNENDFVVGAVVISDDGNKLL
SVSENGLGKQTLAEAYREQSRGGKGIIGMKLTQKTGNLVGVISVDDENLDLMILTASTKM
IRVSIKDIRETGRNASGVKLINTADKVMYVNSCPKEEEPENLENPPAQLFE
NT seq
2496 nt
NT seq
+upstream
nt +downstream
nt
atgcaagataattcagtccaagataattcagtcaatgaaacaaaaaatattgtagaagtg
gggattgattcttctattgaagagagctatttagcctattccatgagcgtgatcataggg
cgtgctttaccggacgctagagatggcttaaagcctgtgcataggcgtattttgtatgcg
atgcatgaattaggccttacttccaaagtcgcttataaaaaaagcgctaggatcgtgggt
gatgtgatcggtaaataccacccccatggcgataacgcggtttatgatgcgctagtgaga
atggcgcaagatttttctatgcgtttggaattagtggatgggcagggcaactttggctct
attgatggcgataacgctgcagcgatgcgttacactgaagccagaatgactaaggcgagt
gaagaaattttaagggatattgataaagacaccattgattttgtgcctaattacgatgac
accttaaaagaaccagatattttaccaagccgtctgcctaaccttttagtcaatggggct
aatgggatcgctgtagggatggcgacttctatcccccctcacagaattgatgaaatcata
gacgctttagcgcatgtcttagaaaaccctaacgctgaattagatgaaattttggaattt
gtcaaagggcctgactttcccactggtgggatcatttatggcaaggcgggcattattgaa
gcctataaaacggggcgagggcgcgtgaaagtgcgggccaaagtgcatgtggaaaagacg
aaaaataaagaaatcatcgttttagatgaaatgccttttcaaaccaataaagccaaatta
gtggaacaaatcagcgatttagcgcgagaaaaacaaattgaaggcattagcgaagtgcgc
gatgaaagcgatagagagggcattagagtggtgattgaattaaaaagagatgcgatgagt
gaaattgtcttaaaccacctttacaaactcaccaccatggagaccacttttagcatcatt
ttactcgctatttacaataaagagcctaagattttcacgcttttagagttgttgcgcctt
ttcttaaaccacagaaaaaccattattataagacgcacgatttttgaattggaaaaggct
aaggctagagcgcatattttagagggctatttgatcgcattagacaatattgatgaaatc
gtgcagctcattaaaacaagccaaagcccagaaacggctaaaaacgccttaatggagcgt
ttcactttgagcgaaatccaaagcaaagccattttagaaatgcgtttgcaacgcttaaca
ggccttgaaagagataaaatcaaagaagaataccaaaacttgttagagcttattgatgat
ctcaatggcattttaaagagcgaagaacgcttgaatggagtcgtcaaaacagagctttta
gaagtcaaagagcaattttcttctccaaggcgcactgaaattcaagaatcttatgaaaat
attgacatagaagatttgatcgctaatgagcctatggtggtgagcatgagctataaaggc
tatgtgaaaagagtggatttaaaagcttatgaaaagcaaaatcgtggcggtaagggcaag
ctttcaggcagcacttatgaagacgacttcattgaaaacttttttgtggctaacacgcat
gatattttgctctttatcaccaataaggggcaattgtatcatctaaaagtctataaaatc
ccagaagcgagccggatcgctatgggtaaagctattgtgaatttaatctcgctcgctcct
gatgaaaagatcatggcaaccttaagcaccaaagactttagcgatgaacgctctttagcc
ttcttcacgaaaaatggtgtggtgaagcgcaccaatttgagcgaatttgggagcaacagg
agttgtggtgtcagagcgattgttttagatgaaggcgatgaattagtgagtgcaaaagtt
gtggataaaaacgctaagcatttgctcatcgcatcgcatttgggtattttcattaaattc
cctttagaagatgtgcgcgagatgggaagaaatgctcgtggggttatagggattaggctg
aatgaaaacgattttgttgtcggtgcggtcgttattagcgatgatggcaacaagcttttg
agcgtgagcgaaaacgggcttggcaagcaaactttagccgaagcgtatagagagcaatct
cgtggaggtaaggggatcattggcatgaagctcactcaaaaaaccggcaatctagtgggc
gttatcagcgtagatgatgagaacctagatttgatgatccttactgcaagcacaaaaatg
atcagagtttctattaaagatattagagaaaccggaagaaacgctagtggggtaaagctc
ataaacaccgccgataaagtcatgtatgtcaattcttgccctaaagaagaagagccagaa
aatttagaaaaccctcctgcacaattatttgagtga
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