Helicobacter pylori oki422: HPOKI422_03560
Help
Entry
HPOKI422_03560 CDS
T03726
Name
(GenBank) membrane protein
KO
K09953
lipid A 3-O-deacylase [EC:3.1.1.-]
Organism
hpyf
Helicobacter pylori oki422
Pathway
hpyf00540
Lipopolysaccharide biosynthesis
hpyf01100
Metabolic pathways
Module
hpyf_M00867
KDO2-lipid A modification pathway
Brite
KEGG Orthology (KO) [BR:
hpyf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
HPOKI422_03560
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
hpyf01005
]
HPOKI422_03560
Lipopolysaccharide biosynthesis proteins [BR:
hpyf01005
]
Lipid A
HPOKI422_03560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxR
Motif
Other DBs
NCBI-ProteinID:
AHN40464
LinkDB
All DBs
Position
complement(705337..706338)
Genome browser
AA seq
333 aa
AA seq
DB search
MFFKFILCLLLGVFAWAKEDILTPLTPSKRYSINLMTENDGYINPYIDEYYTAGNQIGFS
TKEFDFSKNKAMKWTSYLGFFNKSPRVTRFGISLAQDMYTPSLKNRKLVHLHDNHPYGGY
LRVNLNVYNRHKTFMELFTLSLGTTGQDSLAAQTQRLIHKWGHDPQFYGWNTQLKNEFIF
ELHYQLLKKVPLLKTRFFSMELMPGFNVELGNARDYFQLGSLFRAGYNLDADYGVNKVNT
AFDGGMPYSDKFSIYFFVGAFGRFQPLNIFIQGNSPETRGIANLEYFVYASEIGAAMMWR
SIRVAFTITDISKTFQSQPKHHQIGTLELNFAF
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
ttgtttttcaaatttattttatgtttattattaggagtgtttgcatgggcaaaagaggat
attcttaccccattaacgccctctaaacgctattctatcaatttgatgactgaaaatgat
ggttatatcaatccttacattgatgagtattataccgcaggcaatcaaataggcttttct
actaaagagtttgatttttctaaaaataaagcgatgaaatggacttcgtatttagggttt
ttcaataaaagccctagggttactcgttttggtatttctctcgcccaagacatgtatacc
ccctcacttaaaaacagaaaactggtgcatttgcatgacaaccacccttatggggggtat
ttgagggtgaatttgaatgtgtataaccgccataaaactttcatggagttattcacgctt
tctttaggcacgacagggcaagattctttggccgctcaaacgcagcgtctcattcataaa
tggggtcatgacccccaattttatggctggaacacgcagctcaaaaacgaatttattttt
gaattgcactaccaattgctcaaaaaagtcccccttttaaagactcgttttttttctatg
gagttaatgcctgggtttaatgtggaattgggtaatgcgagggattatttccaactcggc
tcgctctttagggctgggtataacctggacgctgattatggtgtcaataaggtcaatacc
gcttttgatgggggcatgccttatagcgataaattttctatctatttttttgtaggggct
tttgggcgcttccaaccccttaacatcttcattcaaggcaatagccctgaaactaggggc
attgctaatttggaatactttgtttatgccagtgaaataggagcggctatgatgtggcgt
agcattagggtggcttttacgatcactgatattagtaaaacctttcaatcccagcctaag
caccatcaaatcggcacattagaattgaattttgctttttga
DBGET
integrated database retrieval system
