Helicobacter pylori oki422: HPOKI422_03820
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Entry
HPOKI422_03820 CDS
T03726
Name
(GenBank) poly(A) polymerase
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
hpyf
Helicobacter pylori oki422
Pathway
hpyf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
hpyf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HPOKI422_03820
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hpyf03019
]
HPOKI422_03820
Enzymes [BR:
hpyf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
HPOKI422_03820
Messenger RNA biogenesis [BR:
hpyf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
HPOKI422_03820
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
AHN40507
LinkDB
All DBs
Position
complement(764291..765499)
Genome browser
AA seq
402 aa
AA seq
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MFELEKELKELFDIYEKSPYELYLVGGCVRDCLMGITPKDYDLTSNALVNESKELLLKHH
FRVLETGIKHGTITALKNDQSYEITTFRIEKGHIKHRKPKELVFSARLTDDLKRRDFSMN
AIAYSPTKGIIDPFKGQNAIRNQTIECVGEARLRFFEDALRILRSLRFSATLGFKIAPST
KEAVFACKDLLKHLSKERLQSELNKLLMGKNAYEVAKEYQEILELVIQEKIENLGFLKNA
PFNLELRLLGFFKHQKSLENLRYPKKTCVLFSKAKECHKAFLNIHNKTELKFLLKNYDLE
PFNLALDFYALKNPKHALKIKSLLKEIFNANEPFKKEHLALKGGTLQSLGYQHQQIGEIL
NACLNLIIAHPKNNALEWLIEWVKDNYLPNDVINFSPIGRKN
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgagttagaaaaagaattaaaagaattgtttgacatttatgaaaaatccccctat
gagctttacttggtaggggggtgcgtgcgcgattgtttgatgggaattaccccaaaagat
tacgatttgacctcaaacgctttagtcaatgaaagcaaagagcttcttttaaagcaccat
tttagggtgctagaaaccggtatcaaacatggcacgatcacggctcttaaaaacgatcaa
agctatgaaattacaacctttagaattgaaaaagggcatatcaaacaccgaaagcctaaa
gaattggtttttagcgctcgtttgacagacgatttaaagcggcgcgattttagcatgaat
gcgatcgcttatagccctacaaaagggattattgatccttttaaagggcagaatgcgatt
agaaatcaaacgattgaatgcgtgggggaagcgcgattgaggttttttgaagacgcttta
aggattttaagatcgctgcgatttagcgcgactttaggctttaaaatagcgccaagcact
aaagaagcggtttttgcgtgtaaggatttgttaaaacacctttctaaagaacgcttacaa
agtgaattgaataagcttcttatggggaaaaacgcctatgaagtggctaaagaatatcaa
gaaattttagagttggttattcaagaaaaaatagaaaatttagggtttttaaaaaacgcg
cctttcaatttggaattaagattattggggttttttaagcatcaaaaaagtttagaaaat
ttacgctaccctaaaaaaacttgtgttttattttcaaaagctaaagaatgccacaaagct
tttttaaatattcataataaaacagaattaaaatttttattaaaaaactacgatttagag
ccttttaatttggctttagatttttatgcgctcaaaaaccccaaacacgctttaaaaatt
aaaagcttgttaaaagaaatatttaacgctaacgaaccttttaaaaaagaacacctagcc
cttaagggcgggacgcttcaaagcttgggttaccaacaccaacaaatcggcgaaatttta
aacgcatgcctaaatttaatcatcgctcaccctaaaaacaacgctttagagtggctgatt
gaatgggttaaagataattatttacctaatgatgttataaacttttcgccaataggcaga
aaaaattaa
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