Helicobacter pylori oki422: HPOKI422_05755
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Entry
HPOKI422_05755 CDS
T03726
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
hpyf
Helicobacter pylori oki422
Brite
KEGG Orthology (KO) [BR:
hpyf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hpyf03016
]
HPOKI422_05755
Enzymes [BR:
hpyf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HPOKI422_05755
Transfer RNA biogenesis [BR:
hpyf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HPOKI422_05755
Prokaryotic type
HPOKI422_05755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AHN40824
LinkDB
All DBs
Position
1166626..1167354
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AA seq
242 aa
AA seq
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MRCFKATIAYDGAYFLGYAKQPNKLGVQDKIEGALNMLGIKSAVIAAGRTDKGVHANNQA
LSFHAPKHWSADKLFYYLAPKLAPHIVLKKLEEKNFHARFDAQKRAYRYLLTKNLKTPFL
APYIACGDYGSLDLLNTALKQFTGKHDFSLFKKEGGATTNPNRIIFNAFAYTAFIMGHEC
VVFKIIGDAFLRSSVRLIIQTCVQYSLEKITLAEIEMQIHNLKATIRTPIMANGLYLHRV
YY
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgcgttgttttaaggctactatcgcttatgatggggcgtattttttaggctatgccaaa
cagcctaacaaactcggcgttcaggataaaatagagggcgctttaaacatgctaggaatt
aaaagcgcagtcatagcagccgggcgcacggataaaggcgtgcatgcgaacaaccaagcg
ctgtcttttcacgctccaaaacactggagcgctgataaattattttattatctagccccc
aaactcgccccgcatattgtcttaaaaaaactagaagaaaaaaacttccatgcgcgtttt
gacgctcaaaaaagagcgtatcgttaccttttgacgaagaatttaaaaacgcctttttta
gcgccctatatcgcttgtggggattatggctcactagatttattaaataccgctttaaag
caattcacaggcaagcatgatttttctttgtttaaaaaagaaggcggggctacaaccaat
cctaatcgcatcatttttaacgcttttgcttatacagcctttatcatggggcatgagtgc
gtggtgtttaaaatcattggcgatgcgtttttacgctccagcgtgcgtttgatcattcaa
acatgcgttcaatattccttagaaaaaatcacgctcgctgaaattgaaatgcaaatccac
aacctcaaagccactataagaacacccataatggctaatggtttgtatttgcacagggtg
tattattga
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