KEGG   Helicobacter pylori oki422: HPOKI422_06095
Entry
HPOKI422_06095    CDS       T03726                                 
Name
(GenBank) signal recognition particle
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
hpyf  Helicobacter pylori oki422
Pathway
hpyf02024  Quorum sensing
hpyf03060  Protein export
hpyf03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:hpyf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HPOKI422_06095
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HPOKI422_06095
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HPOKI422_06095
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:hpyf02044]
    HPOKI422_06095
Enzymes [BR:hpyf01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HPOKI422_06095
Secretion system [BR:hpyf02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HPOKI422_06095
  Eukaryotic Sec-SRP protein
   HPOKI422_06095
SSDB
Motif
Pfam: SRP54 SRP_SPB CbiA SRP54_N AAA_31 Zeta_toxin AAA_22 AAA_30 nSTAND3 AAA_24 cobW NPHP3_N AAA_17 SLFN-g3_helicase 6PF2K AAA_19 APS_kinase ArsA_ATPase AAA_14 AAA_16 Fer4_NifH AAA T2SSE AAA_11 NTPase_1 AAA_33 ABC_tran Thymidylate_kin ParA NACHT KTI12 ResIII AAA_5 TsaE AAA_18 MraZ PhageMin_Tail ParBc ATP_bind_1 YqeC
Other DBs
NCBI-ProteinID: AHN40883
LinkDB
Position
complement(1230190..1231536)
AA seq 448 aa
MFQALSDGFKNALNKIRFQDDEKALDRALDELKKTLLKNDVHHKVARELLKKVESQTKLN
GIGKQQFLDALEKSLLEILSAKGSSGFTFAQTPPTVVLMAGLQGSGKTTTTAKLAHYLKT
KNKKVLLCACDLQRLAAVEQLKVLGEQVGVEVFYEENKSVKEIANNALKRAKEAQFDVLL
VDSAGRLAIDKELMQELKEVKEVLNPHEVLYVADALSGQDGVKSANTFNEEIGVSGVVLS
KFDSDSKGGIALGITYQLGLPLRFIGSGEKIPDLDVFVPERIVGRLMGAGDIISLAEKTA
SVLNPNEAKDLSKKLKKGQFTFNDFLNQIEKVKKLGSMSSLISMIPGLGNMANALKDTDL
ESSLEVKKIKAMVNSMTKKEQENPEILNGSRRKRIALGSGLEVSEINRIIKRFDQASKMA
KRLTNKKGISDLMNLMSQAKNQTPPKMR
NT seq 1347 nt   +upstreamnt  +downstreamnt
atgtttcaagcattaagcgatgggtttaaaaacgcgctcaataaaatccgctttcaagat
gatgaaaaagcgctagacagagcgttagacgaattgaaaaaaacgcttttaaaaaatgat
gtgcatcataaagtggctagagaattgctcaaaaaagtggaaagtcaaactaaacttaat
ggcattggtaagcagcaatttttagacgctttagaaaagagtttgttagaaattttaagc
gctaaagggagcagtggttttactttcgctcaaacgcccccaactgtggttttaatggcc
ggtttgcaagggagcggtaagacaaccaccaccgctaaactcgctcattatttaaaaacc
aaaaataaaaaagtgcttttatgcgcatgcgatttgcaacgcttagcagcggtggagcaa
ttaaaggttttaggcgaacaggtgggcgtggaagtgttttatgaagaaaataaaagcgtg
aaagaaatcgctaacaacgctttaaaaagggctaaagaagcgcaatttgatgttttactt
gtggatagtgcggggcgtttagccattgataaagagcttatgcaagaattaaaggaagtt
aaagaagtcttaaacccccatgaagtgttgtatgtcgcagacgccttgagcgggcaagat
ggggtcaaaagcgcgaacacctttaatgaagaaataggcgtgagtggggtggtgttaagc
aaatttgatagcgattctaaagggggtatcgctttaggtatcacttatcaattaggctta
cccttgcggtttattgggagtggggaaaaaatccctgatttagatgtgtttgtgcctgaa
aggattgtggggcgtttgatgggggctggagatattatctcgctcgctgaaaaaaccgcc
agcgttttaaaccctaatgaagccaaagatttaagcaaaaagctcaaaaaagggcaattc
actttcaacgattttttaaaccagattgaaaaggtgaaaaaattaggctctatgagctct
ctaatctctatgattccaggtttagggaatatggcaaacgcgctgaaagacacggattta
gaaagctctttagaggtgaaaaaaatcaaggctatggtcaattccatgactaaaaaagag
caagaaaacccagagattttaaacggcagccgaagaaaaaggatcgctttagggagcggc
ttagaagtgtctgaaatcaaccgcatcatcaaacgctttgatcaagcgagcaaaatggca
aaacgcttaacgaataaaaagggcattagcgatttgatgaatctaatgagtcaggctaaa
aatcaaacaccccctaaaatgcgctga

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