Helicobacter pylori oki422: HPOKI422_06655
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Entry
HPOKI422_06655 CDS
T03726
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
hpyf
Helicobacter pylori oki422
Pathway
hpyf03030
DNA replication
hpyf03430
Mismatch repair
hpyf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPOKI422_06655
03430 Mismatch repair
HPOKI422_06655
03440 Homologous recombination
HPOKI422_06655
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyf03032
]
HPOKI422_06655
03400 DNA repair and recombination proteins [BR:
hpyf03400
]
HPOKI422_06655
Enzymes [BR:
hpyf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPOKI422_06655
DNA replication proteins [BR:
hpyf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPOKI422_06655
DNA repair and recombination proteins [BR:
hpyf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPOKI422_06655
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DUF1877
Motif
Other DBs
NCBI-ProteinID:
AHN40978
LinkDB
All DBs
Position
complement(1339024..1340046)
Genome browser
AA seq
340 aa
AA seq
DB search
MYRKDLDHYLKQRLPKAVFLYGEFDFFIHYYIQTISTLFKRNNPDTETSLFYASDYEKSQ
IATLLEQDSLFGGSSLVVLKLDFALHKKFKENDINLFLKALERPSHNRLIIGLYNAKSDT
TKYKYTSDFIVKFFQKSPLKDEAICARFFTPKTWESLKFLQEMANFLHLDISSHLLNALF
EINNEDLSISFNDLDKLAILNTPITLEDIQELSSNAGDMDLQKLILGLFLKKSVLDIYDY
LLKEGKKDADILRGLERYFYQLFLFFAHIKTTGLVDAKEVLGYAPPKEITENYAKNALRL
KEAGYKRVFEIFRLWHIQSMQGQKELGFLYLTPIQKIINP
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
atgtatcgtaaagatttggaccattatttaaaacaacgactccctaaagcggtgtttttg
tatggggagtttgatttttttatccattattatattcaaacgattagtacgctttttaaa
cgcaataaccctgacacagaaacttcgcttttttatgcgagcgattatgaaaaaagccag
attgcgacccttttagagcaggattctttatttggagggagcagtttagtcgttttaaaa
ctggattttgcactgcataagaaatttaaagaaaatgatatcaatctttttttaaaggct
ttagagcggcctagccataacaggcttatcatagggctttataatgctaaaagcgacacc
accaaatacaaatacactagcgattttatcgttaaatttttccaaaaaagccccttgaaa
gatgaagcgatctgcgcgcgcttttttacccctaaaacttgggagagtttgaaattctta
caagaaatggctaattttttacatttagacatcagcagccatcttttaaacgctcttttt
gaaattaataacgaagatttaagcatttcgtttaacgatttagacaagctagcgatttta
aatacacccatcactttagaagacattcaagaattaagctccaatgcgggggatatggat
ttgcaaaagctcattttagggctttttttgaaaaaaagcgtgcttgatatttatgattat
ttgttaaaagagggcaaaaaggatgcggatattttaagggggttagagcggtatttttac
cagctttttttatttttcgcccacattaaaacgaccggcttggtggacgctaaagaggtt
ttaggctacgctcctcctaaagaaatcaccgaaaattacgctaaaaacgccttgcgtttg
aaagaagccggctataagagggtttttgaaatttttaggttatggcacattcaaagcatg
caagggcaaaaggaattgggctttttgtatttgacccccattcaaaaaatcattaaccct
tga
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