Helicobacter pylori oki422: HPOKI422_07760
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Entry
HPOKI422_07760 CDS
T03726
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
hpyf
Helicobacter pylori oki422
Pathway
hpyf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpyf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPOKI422_07760
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyf03400
]
HPOKI422_07760
Enzymes [BR:
hpyf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
HPOKI422_07760
DNA repair and recombination proteins [BR:
hpyf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
HPOKI422_07760
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
T2SSM_b
Motif
Other DBs
NCBI-ProteinID:
AHN41183
LinkDB
All DBs
Position
complement(1546448..1547200)
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AA seq
250 aa
AA seq
DB search
MKLISWNVNGLRACMTKGFMDFFNSVDADVFCIQESKMQQEQNTFEFKGYFDFWNCAIKK
GYSGVVTFTKKEPLSVSYGINIEEHDKEGRVITCEFESFYLVNVYVPNSQQALSRLSYRM
SWEVEFRKFLKALELKKPVIVCGDLNVAHNEIDLENPKTNRKNAGFSDEEREKFNELLNA
GFIDTFRYFYPNKEKAYTWWSYMQQARDKDIGWRIDYFLCSHPLKTRLKDALIYKDILGS
DHCPVGLELV
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
atgaaattgatttcatggaatgtgaacgggttaagagcttgcatgactaagggctttatg
gattttttcaacagcgttgatgcggatgttttttgcattcaagaatctaaaatgcaacaa
gaacaaaacacctttgagtttaaagggtattttgatttttggaattgcgcgattaaaaaa
ggctattctggggtggtaactttcactaaaaaagagcctttaagcgtgagctatggtatc
aatatagaagagcatgacaaagaggggcgcgtaataacttgcgaatttgagtccttttat
ttagtgaatgtttatgtccctaattcccaacaagccctatccaggcttagttatcgcatg
agttgggaagtggaatttagaaaatttttaaaagctttagagttaaaaaaacctgtcatt
gtgtgcggggatttgaatgtggcccacaatgaaattgatttagaaaaccctaaaacaaac
cgaaaaaatgcgggctttagcgatgaagagagagagaaatttaacgagcttttgaacgcc
ggttttattgacactttccgttatttttaccctaacaaagaaaaggcttacacctggtgg
agttacatgcaacaagcaagggataaagacattggttggcgcattgattattttctatgc
tctcatcctttaaaaacgcgcttaaaagacgctttaatctataaagatattttagggagc
gatcattgcccggtggggttggaattagtttaa
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