Helicobacter pylori oki422: HPOKI422_07885
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Entry
HPOKI422_07885 CDS
T03726
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
hpyf
Helicobacter pylori oki422
Pathway
hpyf03030
DNA replication
hpyf03430
Mismatch repair
hpyf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPOKI422_07885
03430 Mismatch repair
HPOKI422_07885
03440 Homologous recombination
HPOKI422_07885
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyf03032
]
HPOKI422_07885
03400 DNA repair and recombination proteins [BR:
hpyf03400
]
HPOKI422_07885
Enzymes [BR:
hpyf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPOKI422_07885
DNA replication proteins [BR:
hpyf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPOKI422_07885
DNA repair and recombination proteins [BR:
hpyf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPOKI422_07885
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
GRIP
Motif
Other DBs
NCBI-ProteinID:
AHN41204
LinkDB
All DBs
Position
complement(1576332..1577195)
Genome browser
AA seq
287 aa
AA seq
DB search
MSDSLLHKDIQALIARLKHQDLSLGMLEKSLSRLIYDEINLEYLKTCGLNFIETSENLIT
LKNLKTPLKDEVFSFIDLETTGSCPLKHEILEIGAVQVKGGEIINRFETLVKVKSVPDYI
AELTGITYEDTLNAPSVHEALQELRLFLGNSVFVAHNANFDYNFLGRYFVEKLHCPLLNL
KLCTLDLSKRAILSMRYSLSFLKELLGFGIEVSHRAYADALASYKLFEICLLNLPSYIKT
TMDLIDFSKCANTLIKRPPRARYQETPPPFSLFERTKGLLNIIKATS
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacagcctcttgcataaagatattcaagccctaatcgctcgcttaaagcaccag
gatttaagcttaggcatgctagaaaaatcgctctctcgccttatttatgatgaaatcaat
ttggaatatttaaaaacatgcgggcttaatttcatagaaacgagcgaaaatttaatcacg
ctcaaaaaccttaaaaccccccttaaagatgaggttttttcctttattgatttagagacc
accggctcttgccccctaaaacatgagattttagaaatcggggccgtgcaagtgaagggg
ggggaaattatcaatcgttttgaaacccttgtgaaagtcaaaagcgtgcctgattatatc
gctgagcttacaggcatcacttatgaagacaccctaaacgccccaagcgtgcatgaagct
ttgcaagaattgcggctttttttaggcaatagcgtgtttgtggcccacaacgctaatttt
gattacaactttttagggcgttattttgtagaaaaattgcattgccccttattgaattta
aagctttgcactttggatttatccaaacgcgctattttatccatgcgttattctttgagc
tttttaaaagagcttttagggtttggtatagaagtcagccatagagcctatgcggacgct
ttagcgagctataagctctttgaaatatgcctgttaaacttgcctagctatatcaaaacc
acaatggatttgattgatttttccaaatgtgctaacaccctaatcaaaagacccccaaga
gccagataccaagaaactccaccgccgttttctctttttgagaggacaaagggtttgtta
aacatcataaaagcaaccagttaa
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