Helicobacter pylori oki673: HPOKI673_00660
Help
Entry
HPOKI673_00660 CDS
T03727
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
hpyg
Helicobacter pylori oki673
Brite
KEGG Orthology (KO) [BR:
hpyg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyg03032
]
HPOKI673_00660
03400 DNA repair and recombination proteins [BR:
hpyg03400
]
HPOKI673_00660
Enzymes [BR:
hpyg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HPOKI673_00660
DNA replication proteins [BR:
hpyg03032
]
Prokaryotic type
DNA Topoisomerases
HPOKI673_00660
DNA repair and recombination proteins [BR:
hpyg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HPOKI673_00660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
DUF1272
Zn_ribbon_LysW
Lar_restr_allev
zf_Rg
DUF7575
Motif
Other DBs
NCBI-ProteinID:
AHN41409
LinkDB
All DBs
Position
122561..124771
Genome browser
AA seq
736 aa
AA seq
DB search
MKHLIIVESPAKAKTIKNFLDKNYEVIASKGHVRDLSKFALGIKIDETGFTPNYVVDKDH
KELVKQIIELSKKASTTYIATDEDREGEAIGYHVACLIGGELESYPRIVFHEITQNAILN
ALKTPRQIDMSKVNAQQARRFLDRIVGFKLSSLISSKITKGLSAGRVQSAALKLVIDRER
EIKAFKPLTYFTLDAYFEPHLEAQLISYKGNKLKAQELIDGKKAQEIKNELEKESYTISS
IVKKSKKSPTPPPFMTSTLQQSASSLLGFSPTKTMSIAQKLYEGVATPQGVMGVITYIRT
DSLNIAKEALEEARNKILKDYGKDYLPPKAKVYSSKNKNAQEAHEAIRPTSIILEPNALK
DYLKPEELKLYTLIYKRFLASQMQDALFESQSVVVACEKGEFKASGRKLLFDGYYKILGN
DDKDKLLPNLKENDPIKLEKLESNAHVTEPPAHYSEASLIKVLESLGIGRPSTYAPTISL
LQNRDYIKVEKKQISALESAFKVIEILEKHFEEIVDSKFSASLEEELDNIAQNKADYQQV
LKDFYYPFMDKIEAGKKNIISQKVHEKTGQSCPKCGGELVKKNSRYGEFIACNNYPKCKY
VKQTENANDGAKQELCEKCGGEMVQKFSRNGAFLACNNYPECKNTKSLKNTPNANEIIEG
VKCPECGGDIALKRSKKGSFYGCNNYPKCRFLSNHKPINKRCGKCHYLMSERIYRKKKAH
ECIQCKERVFLEEDDG
NT seq
2211 nt
NT seq
+upstream
nt +downstream
nt
atgaagcaccttattatcgtagaatcccccgcaaaagccaaaaccattaaaaattttttg
gataaaaattacgaagtcatcgcctctaaagggcatgttagggatttgtccaaattcgct
ttaggcattaagattgatgaaacaggctttacccctaattatgtcgtggataaagaccat
aaagagcttgtcaaacagatcatagagctttctaaaaaggcatctaccacctacatcgct
accgatgaagacagagaaggggaagcgataggctatcatgtggcgtgcttgattgggggg
gaattagagagctatcctaggatcgtttttcatgagatcacgcaaaatgcgattttaaac
gctctaaaaaccccacgacaaattgacatgtcaaaggtcaatgcccaacaagccagacgc
tttttagatcggatcgtgggttttaagctcagctcgttgatttcatcaaaaatcactaaa
ggtttgagcgctgggcgggtgcaaagcgcggctttaaagcttgtgattgatagggagaga
gagatcaaagcctttaagcctttaacctacttcacgctagacgcttattttgagccgcat
ttagaagcgcaactcattagctataagggcaacaaactcaaagcccaggagcttattgat
gggaaaaaagctcaagagattaaaaacgaattagaaaaagaaagctacactatttctagt
attgttaaaaaatctaaaaaatcccccacaccgccccctttcatgacttctactttacag
caaagcgcttccagtcttttaggcttttcgcccacaaaaaccatgagcatcgctcaaaaa
ttgtatgaaggcgtagccaccccgcaaggggttatgggggtgatcacttacataaggacc
gatagcttgaatatcgctaaagaagctttagaagaagcgaggaataagattttaaaagac
tatggcaaagactacttaccccctaaagccaaagtctattccagcaagaataaaaacgcc
caagaagcccatgaagcgatcaggcccacttctattattttagagccaaacgctttaaaa
gactaccttaaacctgaagaattaaagctctataccttaatttacaaacgcttcttagct
tctcaaatgcaagacgctctttttgaaagccaaagcgtggttgtggcttgcgaaaaaggc
gagtttaaagccagtggcagaaaactcctttttgatggctattataaaattttaggcaat
gacgataaggacaaattgctccccaatttgaaagaaaacgaccccattaaattagaaaaa
ctagagagcaacgcccatgttacagaacctccagcgcactattcagaagcgagcttgatt
aaagttttagaaagtttaggcataggcaggcccagcacctacgccccaacgatttccctc
ttacaaaacagagactacatcaaggtagaaaaaaagcaaatcagcgctttagagagcgct
tttaaggtgatagaaattttagaaaagcattttgaagaaatcgtggattccaaattcagc
gcttctttagaagaggaactggacaatatcgctcaaaataaagccgactatcagcaagtc
ttaaaggacttttactacccttttatggataaaattgaagctgggaaaaagaatattatc
tctcaaaaagtgcatgaaaaaaccggccaatcatgccctaaatgcggtggggaattggtc
aaaaaaaatagccgttatggggagtttatcgcttgcaacaattaccctaaatgcaaatat
gtcaaacaaactgaaaacgccaatgatggagctaagcaagaattgtgcgaaaaatgcgga
ggggaaatggtgcaaaaattcagcagaaacggagcgtttttagcttgcaacaactaccct
gaatgcaaaaacaccaaatcactaaaaaacacccctaacgcaaacgaaataatagaaggc
gtgaaatgcccagaatgcgggggggatattgccttaaaaaggagcaagaaaggctcgttt
tatggctgcaacaattaccctaaatgccgttttttatccaaccataagcccattaacaag
cgttgtggaaaatgccattatttaatgagtgaaagaatctatcgcaaaaaaaaggcacat
gaatgcatccaatgcaaagagcgcgtgtttttagaggaagatgatggctaa
DBGET
integrated database retrieval system
