Helicobacter pylori oki673: HPOKI673_01890
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Entry
HPOKI673_01890 CDS
T03727
Name
(GenBank) exonuclease
Organism
hpyg
Helicobacter pylori oki673
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
Dna2
Motif
Other DBs
NCBI-ProteinID:
AHN41631
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All DBs
Position
complement(359525..361861)
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AA seq
778 aa
AA seq
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MNLEKLFSQKTPLFVFSSTRRLKHFYLEQGEGFLPNAMSMGSFFEQAFYIPNKKKIPNNA
RLILMIDTIKAIAKEKKSILEGLLLFENSFLGYLESTSFLFDLFDELSSACIKLNELSSK
DIYLDYEKHLEVLEMIYKRYIKKLEELGFYDKIMQEKPTILKEFFEHFSSIEWHLDGFMS
VFERQCLLEVAELVPITLHLSCDKYNQKFLEFLNLKLETDCDYSIDFKTQKILSQTPKRQ
KIEPKLYANSSYLKQSALVLQTIEEYLQKNNNPNKMAIITPNADFLPFLKLLDKNNNLNF
AMGLGAKNSPYYTELVKISENLETSGFSLNASPLLDLENLTLVLLEQQSSKEKAPLKEAH
SQIMHQYHLLKDTLKNYSLKDLLHLYLQEFEANFRLDDSSGGKIRVMDTLETRGMQFDKV
VIVDFNETCVPSLKDCDLFLNSALRKSLNLPTLLDKKNLQKHYYYQLFKNSKEVALSYIE
SETSKVSNMLLELDLHIEPIKDAYTLFESTPLKDYQEEEIKAAIPKDFSFSASSLNAFLT
CKRRFYYHYIKRFKESPKDESNSTIGSLLHELLKEAYEKDKNPYALEERLIQLLETKGNI
TPKERLDTLIVLKKIQAFYVKEKERFNAKIKILDLEKSFETTIQGVSFKGRIDRIDKTAD
NEIILLDYKFKSDLKLDSMSEKQRGSLSPIEIAQISADYQMAIYAFALKNLGYKGPIKAF
FYDLRKGKLLEEEEPILQAKMDYLESSLIPELQQEIDFEKTLEVKDCEYCSFKDMCNR
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagaaaaacttttttcacaaaaaacccccttgtttgtttttagctccaccagg
cgtttgaaacatttctatttagagcaaggcgaagggtttttgcctaacgccatgagcatg
gggagtttttttgaacaggctttttacatccctaataaaaagaaaatccctaacaacgcg
cggctaattttaatgatagacaccattaaagctatcgctaaagaaaaaaaatccattctt
gaagggcttttgctttttgaaaacagctttttggggtatttggaaagcacttcttttttg
tttgatttgtttgatgagttgagttcggcttgtatcaagctcaatgaactttcttctaaa
gacatttatttggattatgaaaagcatttagaagtcttagaaatgatttataagcgctac
attaaaaagctagaagaattgggcttttatgacaaaatcatgcaagaaaagcccaccatt
ttaaaagaattttttgagcatttttcctccattgaatggcatttagacggctttatgagc
gtttttgaaaggcaatgcctattagaagtggccgagttagtgcctatcactttacaccta
tcttgcgataaatacaaccaaaaattcttggaatttttgaatctcaaattagagacagat
tgcgattattccattgattttaaaacccaaaagatcctctcccaaacacccaagcgccaa
aaaatagagccaaagctttatgccaactccagttatttaaaacaaagtgctttagtttta
caaaccatagaagaatatttgcaaaaaaataacaaccctaataaaatggcgatcatcacg
cctaatgcggattttttaccttttttaaaactcttagacaaaaacaacaatttgaatttc
gctatgggattaggggctaaaaacagcccttattatacagagcttgtcaaaatctcagaa
aatttggaaacgagcggttttagtttgaatgcatcgcctttattggatttggaaaacctc
acgctcgtgcttttagaacaacaaagctctaaagaaaaagcaccattaaaagaagcgcat
tctcaaatcatgcaccagtatcatcttttaaaagacacgcttaaaaactacagccttaaa
gatttattgcatttgtatttgcaagaatttgaagccaatttccgcttagacgattctagc
gggggcaaaatacgagtcatggacactttagaaacaaggggcatgcaatttgataaagtc
gtgattgtggatttcaatgaaacttgtgtgccaagccttaaagattgcgatttgttttta
aactctgctttaagaaaatcgctcaacctccccactttattagataagaaaaatttgcaa
aaacattattactaccagctctttaaaaactctaaagaagtggcactttcttatatagag
agcgaaacttcaaaagtttctaacatgcttttggaattggatttgcatatagagcctatt
aaagacgcttacacgctttttgaatcaacccctttaaaagactaccaagaagaagaaatt
aaagccgctatccctaaagattttagctttagcgctagctcattgaacgcttttttaact
tgcaaacgccgtttttactaccactacattaagcgattcaaagaaagccctaaagatgaa
agtaatagcactataggcagtttgctccatgagcttttaaaagaagcttatgaaaaagat
aaaaacccctatgcattagaagagaggctcattcagctcttagaaacaaaaggaaacatt
acccctaaagagcgtttagacactcttatagtgcttaaaaaaatccaggctttttatgtt
aaagaaaaagaacgcttcaatgcaaaaatcaaaatccttgatcttgaaaaaagctttgaa
acaaccattcaaggcgtttcgtttaaaggacgcatagacaggattgacaaaacggctgac
aatgagattattttattggattacaaattcaaaagcgatttgaaattagacagcatgagt
gaaaaacaaagaggaagtttaagccccatagaaatcgctcaaataagcgctgattatcaa
atggccatctatgcgtttgcccttaaaaatctgggttacaaagggcctataaaagccttt
ttttatgatttaagaaagggtaagttactagaagaagaagagcctattttgcaggctaaa
atggattatttagaatcttctcttatccccgagctccaacaagaaattgattttgaaaaa
actctagaggttaaagattgtgaatattgctcttttaaagacatgtgcaaccgatga
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