Helicobacter pylori oki673: HPOKI673_02175
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Entry
HPOKI673_02175 CDS
T03727
Name
(GenBank) RNA polymerase sigma 70
KO
K02405
RNA polymerase sigma factor FliA
Organism
hpyg
Helicobacter pylori oki673
Pathway
hpyg02020
Two-component system
hpyg02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
hpyg00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
HPOKI673_02175
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
HPOKI673_02175
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hpyg03021
]
HPOKI673_02175
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
hpyg02035
]
HPOKI673_02175
Transcription machinery [BR:
hpyg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
HPOKI673_02175
Bacterial motility proteins [BR:
hpyg02035
]
Flagellar system
Flagellar assembly proteins
Stator
HPOKI673_02175
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r2
Sigma70_r4_2
Sigma70_r3
UPF0122
Microp_apicomplexa_17
MarR
MarR_2
KORA
HTH_34
TetR_C_44
HTH_10
DUF4202
DUF7440
DUF4404
Motif
Other DBs
NCBI-ProteinID:
AHN41684
LinkDB
All DBs
Position
413636..414412
Genome browser
AA seq
258 aa
AA seq
DB search
MILMMENRMPKEIQKTQTSETSEKNIEKVLNAYDKQQHHHQDALAIQYLPAVRAMAFRLK
ERLPSSIDFNDLVSIGTEELIKLARRYESALNDSFWGYAKTRVNGAMLDYLRSLDVISRS
NRKLIKSIDAEITKHLNEHGKEPSDAYLAEVLGENIEKIKEAKTASDIYALVPIDEQFNA
IEQDEITKKIEAEELLEHVQKALNQMSEREQILIQLYYFEELNLSEIKEILGITESRISQ
IIKEVIKKVRKSLGVDHG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgattttgatgatggaaaatagaatgcccaaagaaattcaaaaaactcaaacaagcgaa
acaagcgaaaaaaatatagaaaaagttttgaacgcctatgataagcagcaacaccaccat
caagacgcgctcgctatccagtatttaccggccgtgcgcgctatggcgtttcgtttgaaa
gagcgcttgcctagctctattgattttaacgatctggtttctattggcactgaagaattg
attaaattagccaggcgttatgagagcgcgttaaacgattctttttgggggtatgctaaa
actcgtgtcaatggggcgatgttagattatttgcgttctttagatgtgatttctcgctcc
aatagaaagctgattaaaagcattgatgctgagattaccaaacaccttaatgagcatggg
aaagagcctagcgatgcgtatttggcggaggttttaggcgaaaatattgaaaaaataaaa
gaagccaaaacggcttcagatatttatgcgttagtgccaatagatgaacaattcaatgcg
attgagcaagatgagatcactaaaaaaattgaagcagaagagttgttagagcatgtccaa
aaagcgctgaatcaaatgagcgaaagagagcaaatccttatccagctttattactttgaa
gagttgaatttgagcgagattaaagagattttaggcattactgaatcgcgcatttctcaa
atcattaaagaagtgattaaaaaggtgcgtaaatccttaggagtggatcatggctga
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integrated database retrieval system
