Helicobacter pylori oki828: HPOKI828_00995
Help
Entry
HPOKI828_00995 CDS
T03728
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
hpyh
Helicobacter pylori oki828
Pathway
hpyh00260
Glycine, serine and threonine metabolism
hpyh00460
Cyanoamino acid metabolism
hpyh00630
Glyoxylate and dicarboxylate metabolism
hpyh00670
One carbon pool by folate
hpyh00680
Methane metabolism
hpyh01100
Metabolic pathways
hpyh01110
Biosynthesis of secondary metabolites
hpyh01120
Microbial metabolism in diverse environments
hpyh01200
Carbon metabolism
hpyh01230
Biosynthesis of amino acids
hpyh01240
Biosynthesis of cofactors
hpyh04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
hpyh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
HPOKI828_00995
09102 Energy metabolism
00680 Methane metabolism
HPOKI828_00995
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
HPOKI828_00995
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
HPOKI828_00995
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
HPOKI828_00995
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
HPOKI828_00995
Enzymes [BR:
hpyh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
HPOKI828_00995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
AHN42905
LinkDB
All DBs
Position
184382..185632
Genome browser
AA seq
416 aa
AA seq
DB search
MAYFLEQTDSEIFELIFEEYKRQNEHLEMIASENYTFASVMEAMGSVLTNKYAEGYPNKR
YYGGCEVVDKIESLAIERAKKLFNCHFANVQAHSGSQANNAVYHALLKPYDKILGMDLSC
GGHLTHGAKVSLTGKHYQSFSYGVNLDGYIDYEEALKIAQSVKPEIIVCGFSAYPREIDF
KKFREIADEVGALLLGDIAHVAGLVVTGEHANPFPHCHVVSSTTHKTLRGPRGGLILTND
EEIAAKIDKAIFPGTQGGPLMHVIAAKAVGFKENLKPEFKAYVQLVKSNMQVLAKALQEK
NHKLVSGGTSNHLLLMDFLDKPYSGKDADMALGNAGITVNKNTIPGETRSPFVTSGIRIG
SAALSARGMGAKEFEIIGNKISDILNDINNVSLQLHVKEELKAMASQFPVYQQPIF
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
atggcgtattttttagaacaaacggatagtgaaatttttgagcttatctttgaagaatac
aagcggcaaaacgagcatttagaaatgatagcgagcgagaattacacttttgcaagcgtt
atggaggctatggggagtgttttaacgaataaatacgctgaaggctatcctaacaagcgc
tactatggaggctgtgaagtggtggataaaatagaaagcttggccatagaaagggctaaa
aagctttttaattgccacttcgctaatgtgcaagcgcactcaggctcacaagccaataac
gctgtctatcacgctcttttaaagccttatgacaagattttaggcatggatttaagctgt
ggagggcatttaacgcatggggctaaagtgagtttaaccggcaagcattatcagagcttt
tcttatggcgtgaatttagatggttatattgattatgaagaagcgctaaaaatcgctcaa
agcgttaagccagaaatcattgtgtgcgggttttcagcctatccaagggagattgatttt
aagaaatttagagaaatcgctgacgaagtgggagcgttactattaggcgatatagcccat
gtggcaggacttgtggtaaccggtgagcatgctaatcctttcccgcattgccatgtggtt
tcaagcaccactcataagaccttaagagggcctagaggggggcttattttaaccaatgat
gaagaaatagcggctaagattgataaagcgatttttccaggaactcaaggcgggcctttg
atgcatgtaattgctgctaaagcggtggggtttaaagagaatctaaaaccagaatttaaa
gcttatgtgcaattagtgaaatctaacatgcaagttctcgctaaagcgttacaagaaaaa
aaccataagttagtgagtggtggcacttctaaccatttgcttttaatggattttttagat
aagccttatagcgggaaagatgctgatatggcattagggaatgccggaatcaccgtgaat
aaaaacaccattcctggcgaaacgcgcagcccttttgtaacgagtgggataaggattggc
tcagcggcattgagtgcaaggggcatgggagctaaagaatttgaaattatagggaataaa
atatcagatattttgaatgatattaataatgttagtttgcaattgcatgtgaaagaagaa
ttgaaagccatggctagtcaattccctgtgtatcaacaacctattttttaa
DBGET
integrated database retrieval system