Helicobacter pylori oki828: HPOKI828_01405
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Entry
HPOKI828_01405 CDS
T03728
Name
(GenBank) exodeoxyribonuclease VII large subunit
KO
K03601
exodeoxyribonuclease VII large subunit [EC:
3.1.11.6
]
Organism
hpyh
Helicobacter pylori oki828
Pathway
hpyh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HPOKI828_01405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyh03400
]
HPOKI828_01405
Enzymes [BR:
hpyh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HPOKI828_01405
DNA repair and recombination proteins [BR:
hpyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HPOKI828_01405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_L
tRNA_anti_2
tRNA_anti-codon
Viral_P18
Motif
Other DBs
NCBI-ProteinID:
AHN42977
LinkDB
All DBs
Position
261222..262520
Genome browser
AA seq
432 aa
AA seq
DB search
MISLVCYKRGELVDVLSVSEINAQIKALLEATFLQVRVQGEVSNLTIHKVSGHAYFSLKD
SQSAIRCVLFKGNANRLKFALKEGQEVVVFGGISAYVPRGDYQINCFEIEPKDIGSLTLA
LEQLKEKLRLKGYFDEANKLPKPHFPKRVAVITSQNSAAWADMKKIASKRWPMCELVCIN
ALMQGEGCVQSVVESIAYADSFHDTKNAFDAIVVARGGGSMEDLYSFNDEKIADALHLAK
TFSMSAIGHESDFLLSDLVADLRASTPSNAMEILLPSSDEWLQRLDGFNVKLHRSFKILL
HQKKAHLEHLEASLKRLSFENKHHLNALKLEKLKIALENKTLEFLRFKKTLLEKISTQTL
TSPFLQTKTERLNALENALKLAHAHLRLPQFGAFVSKNNQAIELEALKRGDKIELSDEKA
QASAEILSVDRV
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgatctcactcgtttgttataaaaggggggagttggtggatgtattgagcgtgagcgaa
atcaatgcgcaaatcaaagcccttttagaagcgacttttttgcaagttagggttcaaggg
gaagtgagtaatttgactatccataaggtgagcggtcatgcgtatttttcgctcaaagac
agccagtcagccatcagatgcgtgctgtttaaagggaacgctaacaggctcaaattcgct
ttaaaagaagggcaggaagtggttgtttttgggggcattagtgcgtatgttccaaggggg
gattatcaaatcaattgctttgaaatagagcctaaagatataggttcattaaccctagct
ttagagcaattgaaagaaaaattacgccttaagggctattttgatgaagccaataaatta
cccaaaccgcattttcctaaacgagtggcagtcatcacttctcaaaattcggccgcttgg
gcggacatgaaaaagatcgcttccaaacgatggccgatgtgtgaattagtttgcatcaat
gcgttaatgcaaggggagggctgcgttcaaagcgtggtggagagcatcgcttatgcggat
agttttcatgatacaaaaaacgcttttgatgcgattgtggtggctaggggtggggggagc
atggaggatttgtattctttcaatgatgagaaaatcgctgatgcattgcatttggctaaa
actttcagcatgtcagctattgggcatgagagcgattttttattgagcgatttagtagcg
gatttaagggcttctacgccttcaaacgcgatggaaatcctactccctagcagcgatgaa
tggttgcaaagacttgatgggtttaatgtgaaattgcaccgctcttttaaaattttgctc
catcaaaaaaaggcgcatttagagcatttagaggcttctttaaaacgattgagttttgaa
aacaagcaccatttaaacgctttaaaactagagaaactaaaaatcgccctagaaaataaa
accctagaatttttacgcttcaaaaaaacgcttttagaaaaaatctctactcaaacatta
acaagcccttttttacaaactaaaacagagcgattgaacgcactagaaaacgcccttaaa
ctcgctcatgcacatttgagattgccccaatttggggcgtttgtgagcaaaaataaccaa
gcgatagaattagaggcattaaaaaggggcgataaaattgaattgagtgatgaaaaagcc
caagcgagcgctgaaattttgagcgtggatagggtgtag
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