Helicobacter pylori oki828: HPOKI828_01885
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Entry
HPOKI828_01885 CDS
T03728
Name
(GenBank) exonuclease
Organism
hpyh
Helicobacter pylori oki828
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
Cas_Cas4
Dna2
Motif
Other DBs
NCBI-ProteinID:
AHN43068
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All DBs
Position
complement(360021..362357)
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AA seq
778 aa
AA seq
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MNLEKLFSQKTPLFVFSSTRRLKHFYLEQGEGFLPNAMSMGSFFEQAFYIPNKKKIPNNA
RLILMIDTIKAIAKEKKSILEGLLLFENSFLGYLESTSFLFDLFDELSSACIKLNELSSK
DIYLDYEKHLEVLEMIYKRYIKKLEELGFYDKIMQEKPTILKEFFEHFSSIEWHLDGFMS
VFERQCLLEVAELVPITLHLSCDKYNQKFLEFLNLKLETDCDYSIDFKTQKILSQTPKRQ
KIEPKLYANSSYLKQSALVLQTIEEYLQKNNNPNKMAIITPNADFLPFLKLLDKNNNLNF
AMGLGAKNSPYYTELVKISENLETSGFSLNASPLLDLENLTLVLLEQQSSKEKAPLKEAH
SQIMHQYHLLKDTLKNYSLKDLLHLYLQEFEANFRLDDSSGGKIRVMDTLETRGMQFDKV
VIVDFNETCVPSLKDCDLFLNSALRKSLNLPTLLDKKNLQKHYYYQLFKNSKEVALSYIE
SETSKVSNMLLELDLHIEPIKDAYTLFESTPLKDYQEEEIKAAIPKDFSFSASSLNAFLT
CKRRFYYHYIKRFKESPKDESNSTIGSLLHELLKEAYEKDKNPYALEERLIQLLETKGNI
TPKERLDTLVALKKIQAFYVKEKERFHAKIKILDLEKSFETTIQGVAFKGCIDRIDKTAD
NEIILLDYKFKSELKLDNMSKEQRGSLSPIEIAQISADYQMAIYAFALKNLGYKGPIKTF
FYDLRKGKLLEEEEPILQAKMDYLESSLIPKLQQEIDFEKTPEVKDCEYCSFKDMCNR
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atgaacttagaaaaacttttttcacaaaaaacccccttgtttgtttttagctccaccagg
cgtttgaaacatttctatttagagcaaggcgaagggtttttgcctaacgccatgagcatg
gggagtttttttgaacaggctttttacatccctaataaaaagaaaatccctaacaacgcg
cggctaattttaatgatagacaccattaaagctatcgctaaagaaaaaaaatccattctt
gaagggcttttgctttttgaaaacagctttttggggtatttggaaagcacttcttttttg
tttgatttgtttgatgagttgagttcggcttgtatcaagctcaatgaactttcttctaaa
gacatttatttggattatgaaaagcatttagaagtcttagaaatgatttataagcgctac
attaaaaagctagaagaattgggcttttatgacaaaatcatgcaagaaaagcccaccatt
ttaaaagaattttttgagcatttttcctccattgaatggcatttagacggctttatgagc
gtttttgaaaggcaatgcctattagaagtggccgagttagtgcctatcactttacaccta
tcttgcgataaatacaaccaaaaattcttggaatttttgaatctcaaattagagacagat
tgcgattattccattgattttaaaacccaaaagatcctctcccaaacacccaagcgccaa
aaaatagagccaaagctttatgccaactccagttatttaaaacaaagtgctttagtttta
caaaccatagaagaatatttgcaaaaaaataacaaccctaataaaatggcgatcatcacg
cctaatgcggattttttaccttttttaaaactcttagacaaaaacaacaatttgaatttc
gctatgggattaggggctaaaaacagcccttattatacagagcttgtcaaaatctcagaa
aatttggaaacgagcggttttagtttgaatgcatcgcctttattggatttggaaaacctc
acgctcgtgcttttagaacaacaaagctctaaagaaaaagcgccattaaaagaagcgcat
tctcaaatcatgcaccagtatcatcttttaaaagacacgcttaaaaactacagccttaaa
gatttattgcatttgtatttgcaagaatttgaagccaatttccgcttagacgattctagc
gggggcaaaatacgagtcatggacactttagaaacaaggggcatgcaatttgataaagtc
gtgattgtggatttcaatgaaacttgtgtgccaagccttaaagattgcgatttgttttta
aactctgctttaagaaaatcgctcaacctccccactttattagataagaaaaatttgcaa
aaacattattactaccagctctttaaaaactctaaagaagtggcgctttcttatatagag
agcgaaacttcaaaagtttctaacatgcttttggaattggatttgcatatagagcctatt
aaagacgcttacacgctttttgaatcaacccctttaaaagactaccaagaagaagaaatt
aaagccgctatccctaaagattttagctttagcgctagctcattgaacgcttttttaact
tgcaaacgccgtttttactaccactacattaagcgattcaaagaaagccctaaagatgaa
agtaatagcactataggcagtttgctccatgagcttttaaaagaagcttatgaaaaagat
aaaaacccctatgcattagaagaaaggctcattcagctcttagaaacaaaaggaaacatt
acccctaaagagcgtttagacactcttgtagcgcttaaaaaaatccaggctttttatgtt
aaagaaaaagaacgctttcatgcaaaaatcaaaatccttgatcttgaaaaaagctttgaa
acaaccattcaaggcgttgcgtttaaagggtgcatagacaggattgacaaaacggctgac
aatgagattattttattggattacaaattcaaaagcgagttgaaattagacaacatgagt
aaagaacaaagaggaagtttaagccccatagaaatcgctcaaataagcgctgattatcaa
atggccatctatgcgtttgcccttaaaaatttgggttacaaagggcctataaaaaccttt
ttttatgatttaagaaagggtaagttactagaagaagaagagcctatcttgcaggctaaa
atggattatttagaatcttctcttatccccaagctccaacaagaaattgattttgaaaaa
actccagaggttaaagattgtgaatattgctcttttaaagacatgtgcaaccgatga
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