Helicobacter pylori oki828: HPOKI828_01920
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Entry
HPOKI828_01920 CDS
T03728
Name
(GenBank) ABC transporter permease
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
hpyh
Helicobacter pylori oki828
Pathway
hpyh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hpyh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
HPOKI828_01920
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hpyh02000
]
HPOKI828_01920
Enzymes [BR:
hpyh01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
HPOKI828_01920
Transporters [BR:
hpyh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
HPOKI828_01920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_16
RsgA_GTPase
DEAD
ABC_membrane_2
ABC_ATPase
AAA_29
nSTAND3
KAP_NTPase
Ribosomal_L10
nSTAND1
AAA_5
SLFN-g3_helicase
AAA_30
Mg_chelatase
NACHT
Motif
Other DBs
NCBI-ProteinID:
AHN43075
LinkDB
All DBs
Position
369174..370829
Genome browser
AA seq
551 aa
AA seq
DB search
MKLFFRRYSKYLKEHYKSFIVVLFSSLVVALSTAWGTYLVKPTLDEIFINKDTQMLKILP
FLVILAYLGKSGGMYLGTYFTNFIGLDIVKKIRNTMLESLLKMEMDFFNRTKKGELIAKI
TNDIGLIRASLSNYLSESIREGLTIVGLVGVVVYQSPKLALVGLVIMPLAAIPIGKIIRK
VKKLAKSHQESNAKITARLSEVFNNVEAIKISNGEKLEHKAFVKENEAFFKIGIKNIAVA
EISSPLMEFLGSIAIALVIYLGGNEVIRGHISVGAFFSFITALFMLYTPIKRLTRIVSNF
QEALVASDRIHEILEREPAIVDGGLTLNNAIHTIEFKKVWLAYTLDNQERYVLSDISLKF
QQNEIIALKGESGSGKSSLVNLILRLYEPSKGEIFINNQKIESITQKSLREKISVVTQRV
FIFNGSVAENVAYGLEIDEVKIKECLKKAQALDFVEKMPHGIESVLDEFGANLSGGQRQR
IAIARALYKDAQVLIFDEATSALDNNTEESVKQSILELKQNRLIILISHNPSTLKLATKH
VKLEHGRLIEC
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
ttgaaactctttttcaggcgttattctaaatatcttaaagagcattataaaagttttata
gtggttttattttcttctttagtggtggctttaagcacggcttgggggacttacttggtc
aagcccactttagatgaaatttttatcaataaagacactcaaatgctcaaaatcctgcct
tttttagtgattttggcgtatttgggcaagagtgggggcatgtatttaggcacttatttc
actaactttatcgggcttgatattgtcaaaaaaatacgcaacaccatgttagaaagcctt
ctcaaaatggaaatggatttttttaacaggactaaaaagggcgaattgattgcaaaaatc
accaatgatataggtttgattagagcgagtttgtccaattacctttcagagagcataaga
gaggggctaacgattgttgggttagtgggggtggtggtttatcaaagccctaaattagcg
ttagtggggctagtgatcatgcccctagccgccattcctatcggtaaaatcattcgtaag
gtaaaaaaactcgctaaatcccatcaagagagtaacgccaaaatcaccgctcgtttgagt
gaagtctttaacaatgtggaagcgattaaaatctctaatggcgaaaaattagaacataag
gcttttgtgaaagaaaatgaagcgttttttaaaatcggcatcaaaaacatcgccgtggct
gaaatttcttcgcctttaatggagtttttaggctctatcgctatagcgctagtgatttat
ttaggggggaatgaagtgattaggggtcatattagcgtgggggcgtttttttctttcatc
acggccctttttatgctctatacgccgatcaaacgcttaactaggattgtttctaatttt
caagaagccttagtcgctagcgacaggatccatgagattttagaaagagagccggctatt
gttgatgggggattaacgctaaataacgctatacacaccatagaatttaaaaaagtatgg
ctggcttatacgctagataatcaagagcgttatgttttaagcgacattagtttgaaattc
caacaaaatgaaatcatcgctttaaaaggcgaaagcgggagcggtaaaagctcattggtg
aatctgatcttacgcctttatgagccaagcaagggcgaaattttcatcaataatcaaaaa
atagagagcatcactcaaaaatccttaagagaaaagattagcgttgtcactcaaagggtg
tttatttttaacgggagcgtggctgaaaatgtggcgtatggtttagaaattgatgaggta
aaaatcaaagaatgcttaaaaaaagctcaagccttagattttgtggaaaaaatgcctcat
gggatagagagtgttttagatgaatttggcgctaatcttagcggtggccaacgccaaaga
atcgccattgcaagagctttgtataaagacgctcaagttttaatttttgatgaggccact
tccgctttggacaataacacagaagagagcgttaaacaaagcattttagaattgaaacaa
aatcgcttgatcattctcatctcacacaacccaagcacgctaaaattagccactaagcat
gtgaaattagagcatgggcgtttgatagaatgctaa
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