Helicobacter pylori oki828: HPOKI828_02040
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Entry
HPOKI828_02040 CDS
T03728
Name
(GenBank) Holliday junction DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
hpyh
Helicobacter pylori oki828
Pathway
hpyh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HPOKI828_02040
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyh03400
]
HPOKI828_02040
Enzymes [BR:
hpyh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPOKI828_02040
DNA repair and recombination proteins [BR:
hpyh03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HPOKI828_02040
RecFOR pathway proteins
HPOKI828_02040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
DUF815
RNA_helicase
AAA_3
nSTAND3
AAA_2
AAA_14
Sigma54_activ_2
TIP49
bpMoxR
Bac_DnaA
DUF3738
Rad17
HAMP_2
AAA_7
Motif
Other DBs
NCBI-ProteinID:
AHN43097
LinkDB
All DBs
Position
complement(388913..389923)
Genome browser
AA seq
336 aa
AA seq
DB search
MKERIVNLETLDFETSQEVSLRPNLWEDYIGQEKIKSNLQISICAAKKRQESLDHMLFFG
PPGLGKTSISHIIAKEMETNIKITAAPMIEKSGDLAAILTNLQAKDILFIDEIHRLSPAI
EEVLYPAMEDFRLDIIIGSGPAAQTIKIDLPPFTLIGATTRAGMLSNPLRDRFGMSFRMQ
FYSPSELALIIKKAATKLNQDIKEESADEIAKRSRGTPRIALRLLKRVRDFALVKNSSLM
DLNITLHALNELGVNELGFDEADLAYLSLLANAQGRPVGLNTIAASMREDEGTIEDVIEP
FLLANGYLERTAKGRIATPKTHALLKIPTLNPQTLF
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaacggatagtcaatttagaaactttggattttgaaacttctcaagaagtgagt
ttgcgccctaatctctgggaagattatatcggtcaagaaaagattaaaagcaatttgcaa
atttccatttgcgcagctaaaaaacgccaagaaagtttggatcacatgctcttttttggc
ccgcccggtttgggtaaaacttcaataagccatatcatcgctaaagaaatggaaaccaat
atcaaaatcaccgccgctcccatgatagaaaaaagcggtgatttggccgccattttgact
aatttgcaagctaaagacatcctttttattgatgaaatccaccggcttagcccagcaatt
gaagaggttttatacccggctatggaagatttcaggctggatattatcataggttcaggc
ccagcggctcaaactattaaaattgatttgccccctttcaccctcatcggcgctaccacc
agagccggaatgctctctaaccccttaagagacagatttggcatgagctttaggatgcaa
ttttatagccctagcgaactagcccttatcatcaaaaaagccgccactaaactcaaccaa
gacatcaaagaagaaagcgctgatgaaatcgctaaaaggagtagaggcacgccaaggatt
gctttaaggcttttaaaaagggtgcgcgattttgcgttagtcaaaaattcaagcttgatg
gatttaaacatcactttgcatgctttgaatgagttaggcgtgaatgaattaggctttgat
gaagcggatttggcgtatttgtctttgttggctaacgctcaaggacgaccggtaggtttg
aacacgattgcagcatctatgagagaagatgaaggcacgattgaagatgtgattgagcct
tttttactcgctaatggttatttagagcgcaccgctaaaggcagaatcgccacgcctaaa
acccatgcgcttttaaaaatccccactttaaacccccaaactttattttaa
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