Helicobacter pylori oki828: HPOKI828_02515
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Entry
HPOKI828_02515 CDS
T03728
Name
(GenBank) virD4 coupling protein
Organism
hpyh
Helicobacter pylori oki828
Pathway
hpyh03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
hpyh00001
]
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
HPOKI828_02515
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
T4SS-DNA_transf
TrwB_AAD_bind
TraG-D_C
Dsl1_C
Motif
Other DBs
NCBI-ProteinID:
AHN43179
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Position
complement(493478..495325)
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AA seq
615 aa
AA seq
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MCYDKPLGAMIVAPPGAGKTACVALPNLLTLPNSCIITDIKGELRDKTAGYRQKFLNNRI
LIFNPYGDDNTCYFNPFDKRIVKPMNFDQRLRLVQENANNVFISEEKGEDHWVSKAKDLF
SFYALYDVCSKDETNFFDVAMGPNRDYVNLIDKRSRYYKQLYQHDKKTGEIILDPQTNEP
ILIPNVNARKLWYLQVSEQKYADPKDPRNFGPNEPEPTPRSEEALDEIVRNDARAWANSA
EEEFASIISTFNRFVSVFKSNQVRIATSKMSFDYEELRTDNISLYIVIAQKDINTLAPLV
RVILESIAKNLLTNESSKKEERIYMILDEFVRFGKLPFLLEMPALCRSYNVVPLFITQDY
AMIRKYYSDDDLKILKGVVHYNIVFKMNSAEDAEIVSKEVGEFTRQSKNYSTEKNQLVFG
GSSSYSHEGRNLLTAQDIMNIESDEVIVIVTGAKATPLKLKANYWFKDKELLKRANLPID
LEGERKRVEEPTQPTTEITAPPNQNKQDTANLEPSNKGGYTENESSESNNENNPTTPQKE
SENSNPTEIEKDHENPTTSQEKSKNENTEQENDETDEILKKPLNEMNTEEKRVLFKKMQQ
GDEESEQEVLQDTQS
NT seq
1848 nt
NT seq
+upstream
nt +downstream
nt
atgtgttatgacaagcctttaggagccatgattgtcgcaccacccggagctggtaaaacc
gcatgcgtggctttaccaaatctattgactttgcctaatagctgtattatcacagacatt
aaaggcgaattaagagataagaccgcagggtataggcaaaaattcttaaacaataggatt
ttaatctttaatccttatggtgatgataacacttgctattttaatccttttgataaaagg
attgtaaaacccatgaactttgaccaacgcctaaggcttgttcaagaaaatgctaataat
gtcttcattagcgaagaaaaaggcgaagaccattgggtatctaaagctaaagatttgttt
agtttttatgccttgtatgatgtttgttccaaagatgaaacaaacttttttgatgtcgct
atgggtccaaatagagattatgttaatttgattgacaaaagaagccgttattacaaacaa
ctctatcaacacgataaaaaaacaggcgaaattatcctagacccacaaactaatgagcct
attttaatccctaatgtgaatgcgagaaaattgtggtatttgcaagtttcagagcaaaaa
tacgccgaccccaaagaccctagaaattttggcccaaatgaacctgaaccaactcctaga
agtgaagaggcattagatgaaattgtaagaaatgatgcaagagcttgggctaatagtgct
gaagaagaatttgcaagtatcatttctacctttaatcgctttgtgtctgtttttaagagc
aatcaagtaagaattgctacttctaaaatgagctttgattatgaagaattaagaacggac
aatattagtctttatattgttattgctcaaaaagatattaacacgcttgctcccttagtt
agagtgattttagaaagcattgctaaaaacttattaactaatgaaagctctaaaaaagaa
gaacgcatttatatgattttagatgaatttgttagatttggtaagttgcccttcttatta
gaaatgccagcattgtgtcgttcttataatgttgtccccttattcatcacacaagattat
gcgatgattagaaaatattatagcgatgatgatttgaaaatcttaaaaggcgtggtgcat
tataacattgtctttaagatgaatagcgctgaagatgctgagattgtctctaaggaagtg
ggcgaatttactagacaatctaaaaactattctactgaaaaaaatcaattagtctttgga
ggtagttcttcttatagccatgagggtagaaacttactcacagcccaagacattatgaat
atagaatcagatgaagtcattgtaattgttacaggggctaaagcgacccctttaaaactt
aaggctaattattggttcaaagataaagagcttttaaaaagagctaatttgcctattgat
ttagaaggagaaagaaaaagagttgaagaacctacgcaacccactacagaaattacagcg
ccccctaatcaaaacaaacaagatacagctaacttagaaccaagtaataagggaggatat
acagaaaatgaaagtagtgaaagcaacaacgagaataatcccactacaccacaaaaagag
agtgaaaattcaaacccaacagaaatcgagaaagaccatgaaaaccccactacttcacaa
gaaaaaagcaaaaatgaaaacacggagcaagaaaatgatgagactgatgagattttaaaa
aagccactcaatgaaatgaacacagaagaaaaaagagtcttgtttaagaaaatgcaacaa
ggcgatgaagaaagcgaacaagaagttctacaagacacccaaagttaa
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