Helicobacter pylori oki828: HPOKI828_03315
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Entry
HPOKI828_03315 CDS
T03728
Name
(GenBank) family 4 uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
hpyh
Helicobacter pylori oki828
Pathway
hpyh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
hpyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HPOKI828_03315
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyh03400
]
HPOKI828_03315
Enzymes [BR:
hpyh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HPOKI828_03315
DNA repair and recombination proteins [BR:
hpyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HPOKI828_03315
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AHN43316
LinkDB
All DBs
Position
657364..657954
Genome browser
AA seq
196 aa
AA seq
DB search
MERLLGETYTNTNLTKPQNKPLNKQVYEGIENCNLCKRHQNSKPVIGLFNPTSKLTFITL
TPMLDSQSNFLSNLKAAMLESIIQKVFNCPLKDCSILSLLKCDSNSLNLEEEINACLFHL
TWQLDNSASKVIVVFGEILPKRLLNLSKEESFGRIVSLKTKHFLSTHALEDMLKNPTLKK
EALAHFKIALQFLNQS
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atggagcgtcttttgggcgaaacttacacgaataccaaccttaccaagccccaaaataag
ccccttaacaaacaagtttatgagggcatagaaaattgcaatctgtgcaaacgccatcaa
aattcaaaaccggtgatcgggctttttaaccccacttccaagctcactttcatcacgcta
acccccatgctagatagccaatcaaatttcttaagcaatttaaaagcggccatgttagag
agcattatccaaaaagtttttaactgccccttaaaagattgcagtattttatcgctcctt
aaatgcgactctaacagccttaatttagaagaagaaatcaacgcatgcctattccattta
acctggcaattagacaacagcgcttcaaaagtcattgtggtatttggcgagattttgccc
aaacgccttttaaacctttctaaagaagaatcctttgggcgcatcgtgtctttaaaaaca
aaacattttttaagcacccatgctttagaggacatgctcaaaaaccccacgctcaaaaaa
gaagcgttagcacattttaaaatagcgcttcaatttcttaaccagtcttaa
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