KEGG   Helicobacter pylori oki828: HPOKI828_03560
Entry
HPOKI828_03560    CDS       T03728                                 
Name
(GenBank) DNA gyrase subunit A
  KO
K02469  DNA gyrase subunit A [EC:5.6.2.2]
Organism
hpyh  Helicobacter pylori oki828
Brite
KEGG Orthology (KO) [BR:hpyh00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hpyh03032]
    HPOKI828_03560
   03400 DNA repair and recombination proteins [BR:hpyh03400]
    HPOKI828_03560
Enzymes [BR:hpyh01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.2  DNA topoisomerase (ATP-hydrolysing)
     HPOKI828_03560
DNA replication proteins [BR:hpyh03032]
 Prokaryotic type
  DNA Topoisomerases
   HPOKI828_03560
DNA repair and recombination proteins [BR:hpyh03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHIIR (short-homology-independent illegitimate recombination)
     Facilitator
      HPOKI828_03560
SSDB
Motif
Pfam: DNA_topoisoIV DNA_gyraseA_C Retrotran_gag_2
Other DBs
NCBI-ProteinID: AHN43362
LinkDB
Position
715102..717588
AA seq 828 aa
MQDNLINETKNIVEVGIDSSIEESYLAYSMSVIIGRALPDARDGLKPVHRRILYAMHELG
LTSKVAYKKSARIVGDVIGKYHPHGDNAVYDALVRMAQDFSMRLELVDGQGNFGSIDGDN
AAAMRYTEARMTKASEEILRDIDKDTIDFVPNYDDTLKEPDILPSRLPNLLVNGANGIAV
GMATSIPPHRIDEIIDALVHVLENPNAGLDEILEFVKGPDFPTGGIIYGKAGIIEAYKTG
RGRVKVRAKVHVEKTKNKEIIVLDEMPFQTNKAKLVEQISDLAREKQIEGISEVRDESDR
EGIRVVIELKRDAMSEIVLNHLYKLTTMETTFSIILLAIYNKEPKIFTLLELLRLFLNHR
KTIIIRRTIFELEKAKARAHILEGYLIALDNIDEIVQLIKTSQSPEAAKNALMERFTLSE
IQSKAILEMRLQRLTGLERDKIKEEYQNLLELIDDLNGILKSEDRLNEVVKTELLEVKEQ
FSSQRRTEIQEVYENIDIEDLIANEPMVVSMSYKGYVKRVDLKAYERQNRGGKGKLSGNT
YEDDFIENFFVANTHDILLFITNKGQLYHLKVYKIPEASRIAMGKAIVNLISLAPDEKIM
ATLSTKDFSDERSLAFFTKNGVVKRTNLSEFGSNRSYSGIRAIVLDEGDELVSAKIVDKN
AKHLLIASYFGIFIKFPLEDVREIGRTTRGVIGIRLNENDFVVGAVVISDDGNKLLSVSE
NGLGKQTLAEAYREQSRGGKGIIGMKLTQKTGNLVSVISVDDENLDLMILTASAKMIRVS
IKDIKETIGRNTSGVKLIDTADKVVYANSCPKEEEPENLENPPTQLFE
NT seq 2487 nt   +upstreamnt  +downstreamnt
atgcaagataatttaatcaatgaaacaaaaaatattgtagaagtggggattgattcttct
attgaagagagctatttagcttattcaatgagcgtgatcatagggcgtgctttaccggac
gctagagatggtttaaagcctgtgcataggcgtattttgtatgcgatgcatgaattaggc
cttacttccaaagtcgcttataaaaaaagcgctaggatcgtgggtgatgtgattggtaaa
taccacccccatggcgataatgcggtttatgatgcgctagtgagaatggcgcaagatttt
tctatgcgtttggaattggtggatgggcaaggcaactttggctctattgatggcgataac
gctgcagcgatgcgttacactgaagccagaatgactaaggcgagtgaagaaattttaagg
gatattgataaagacaccattgattttgtgcctaattatgatgacaccttaaaagagccc
gatattttaccaagccgtctgcctaaccttttagtcaatggggctaacgggatcgctgta
gggatggcgacttctatcccccctcacaggattgatgaaatcatagacgctttagtgcat
gtcttagaaaaccctaacgctggattagatgaaattttggaatttgtcaaagggcctgat
tttcccactggcgggatcatttatggcaaggcgggtattattgaagcctataaaacgggg
cgagggcgcgtgaaagtgcgtgccaaagtgcatgtggaaaagacgaaaaataaagaaatc
atcgttttagatgaaatgccttttcaaaccaataaagccaaattagtggaacaaatcagc
gatttagcgcgagaaaaacaaattgaaggcattagtgaagtgcgcgatgagagcgataga
gagggcattagagtggtgattgaattaaaaagagacgcgatgagtgaaattgtcttaaac
cacctttacaaactcaccaccatggagaccacttttagcatcattttactcgctatctat
aataaagagcctaagattttcacgcttttagagttgttgcgccttttcttaaaccacaga
aaaaccattattataagacgcactatttttgaattagagaaggctaaggctagagcgcat
attttagagggctatttgatcgcattagacaatattgatgaaattgtgcaactcattaaa
acaagccaaagcccagaagcggccaaaaacgccttaatggagcgttttactttgagcgaa
atccagagcaaagccattttagaaatgcgtttgcagcgcttaacaggccttgaaagagat
aaaatcaaagaagaataccaaaacttgttggagcttattgatgatctcaatggcatttta
aagagcgaagatcgcttgaatgaggtcgtcaaaacagagcttttagaagtcaaagagcaa
ttttcttctcaaaggcgcactgaaattcaagaagtttatgaaaatattgacatagaagat
ttgatcgctaatgagcctatggtggtgagcatgagctataaaggctatgtgaaaagagtg
gatttaaaagcttatgaaaggcaaaatcgtggcggtaagggcaagctttcaggcaacact
tatgaagacgatttcattgaaaacttttttgtggctaacacgcatgatattttgctcttt
atcaccaataaggggcaattgtatcatttgaaagtctataagatcccagaagcgagccgg
atcgctatgggtaaagctatcgtgaatttaatctcgctcgctcctgatgaaaagatcatg
gcgactctaagcaccaaagactttagcgatgaacgctctttagctttcttcacgaaaaat
ggtgtggtgaagcgcaccaatttgagcgaatttggcagcaataggagttatagcggtatc
agagcgattgttttagatgaaggcgatgaattagtgagcgcaaaaattgtggataaaaac
gccaagcatttgctcatcgcatcgtattttggcattttcattaaattccctttagaagat
gtgcgcgagatcggaagaactactcgtggggttatagggattagactgaatgaaaatgat
tttgttgtcggtgcggtcgttattagcgatgatggcaacaagcttttgagcgtgagtgaa
aacgggcttggcaagcaaactttagccgaagcgtatagagagcaatctcgtggcggtaag
gggatcattggcatgaagctcactcaaaaaaccggcaatctggtgagcgttatcagcgtg
gatgatgaaaacctggatttgatgatccttactgcaagtgcgaaaatgatcagagtttct
attaaagatattaaagaaaccatcggaagaaatactagtggggtaaaactcatagacacc
gccgataaagtcgtgtatgccaattcttgccctaaagaagaagagccagaaaatttagaa
aatcctcccacacaattgtttgaatga

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