Helicobacter pylori oki828: HPOKI828_03635
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Entry
HPOKI828_03635 CDS
T03728
Name
(GenBank) DNA polymerase III subunit gamma/tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
hpyh
Helicobacter pylori oki828
Pathway
hpyh03030
DNA replication
hpyh03430
Mismatch repair
hpyh03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
hpyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HPOKI828_03635
03430 Mismatch repair
HPOKI828_03635
03440 Homologous recombination
HPOKI828_03635
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
hpyh03032
]
HPOKI828_03635
03400 DNA repair and recombination proteins [BR:
hpyh03400
]
HPOKI828_03635
Enzymes [BR:
hpyh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HPOKI828_03635
DNA replication proteins [BR:
hpyh03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HPOKI828_03635
DNA repair and recombination proteins [BR:
hpyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HPOKI828_03635
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
RuvB_N
AAA_14
AAA_5
DNA_pol3_gamma3
RCF1-5-like_lid
AAA_30
DEAD
ResIII
TIP49
AAA_19
AAA_assoc_2
Motif
Other DBs
NCBI-ProteinID:
AHN43377
LinkDB
All DBs
Position
complement(732021..733727)
Genome browser
AA seq
568 aa
AA seq
DB search
MQVLALKYRPKHFSELVGQESVAKTLSLALDNQRLANAYLFSGLRGSGKTSSSRIFARAL
MCEKGPKAVPCDTCTQCQSALNNHHIDIIEMDGASNRGIDDVRNLIEQTRYKPSFGRYKI
FIIDEVHMFTTEAFNALLKTLEEPPSHVKFLLATTDALKLPATILSRTQHFRFKKIPENS
VIAHLKTILEKEQVSYETSALEKLAHSGQGSLRDTITLLEQAINYCDNAITESKVAEMLG
AIDRSVLEDFFQSLINQDEARLQECYAILENYETESVLEEMMLFLKAKLLSPDAYSILLT
ERFFKIIMSSLSLLKEGANASFVLLLLKMKFKEALKLKALDDAILELEQSKESVLKPLNQ
NANAFKQEPKSAEKREKPEKKENAETPQTPMLSAKDRIFHNLFKQVQTLVYERNYELGAV
FEKNIRFIDFDSQTKTLTWESLATHKDKELLRERFKIVKSIVDGVFGKGENIKIALKNHS
ENKSAKEVVKEFKFPYSKPKPTTETTAEMKENDTKEAVENDTKENDAKEVQETQPKETPT
ALQEFMANHSDLIEEIKSEFEIKSVELL
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgcaggttttagcgttaaaataccgccccaaacattttagcgaactagtcggtcaagag
agcgtggctaaaacgctttctttagccctagacaaccagcgtttggctaacgcttattta
ttcagcgggttaagaggttcaggcaaaaccagctcttctaggatttttgctagggcttta
atgtgtgaaaaagggccaaaagctgtgccttgcgatacttgcacccaatgccagagcgct
ttaaacaaccaccatatagatattatagaaatggacggggcgtctaatagggggattgat
gatgtccgtaatctcatagagcaaacgcgctacaaaccaagctttgggcgctataaaatc
tttatcattgatgaagtgcatatgttcaccaccgaagcgtttaacgcgcttttaaagacc
ttagaagagcctcctagccatgtgaaattccttttagcgacaacggacgccttgaaattg
cctgctaccatactcagccgcacccagcatttcaggtttaaaaaaatccctgaaaattcc
gttattgctcatttaaaaaccattttagaaaaagaacaagtgagttatgaaacaagcgcg
ttagaaaaactagctcacagcgggcaagggagcttgagggatacgatcactcttttagag
caggctatcaattattgcgataacgctatcacagaaagcaaagtggctgaaatgttagga
gcgattgatcggagtgttttagaagatttttttcaaagcctaatcaaccaagatgaagca
cgattgcaagagtgttatgccattttagaaaattatgaaaccgagagcgttttagaagaa
atgatgctttttttgaaagcgaaattattaagccctgatgcttattccatccttttaaca
gagcgcttttttaaaatcattatgagtagtttgagccttttaaaagaaggggctaatgcc
agttttgtgctgttgttattgaaaatgaaattcaaagaagctttaaaactcaaagcccta
gacgatgcgattttggaattagagcaaagtaaagaaagcgttttaaagcccttaaaccaa
aacgctaacgcttttaaacaagaacccaaaagcgcagagaaaagagaaaagccagaaaaa
aaagaaaacgcagaaacccctcaaacccccatgctttcagctaaagatcgcatttttcac
aaccttttcaaacaagtccaaacattggtttatgagcgcaactacgaattaggggcggtg
tttgaaaaaaatatccgtttcattgattttgacagccagactaaaaccttgacttgggag
tctttagccacccataaagataaagagcttttaagagagcgttttaaaattgtgaaaagt
atcgttgatggggtttttggcaagggcgaaaatatcaaaatcgctctaaaaaatcattca
gaaaataaaagcgctaaagaagtggttaaagagtttaaattcccttattcaaagcccaaa
ccaaccaccgaaacgacggctgaaatgaaagaaaacgacactaaagaggcggttgaaaac
gacactaaagaaaacgacgctaaagaggttcaagaaacccaaccaaaagaaacccctaca
gctttgcaagaattcatggctaaccattccgatctcattgaagagattaagagcgagttt
gaaatcaaaagcgtggaattgttatga
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