Helicobacter pylori oki828: HPOKI828_04625
Help
Entry
HPOKI828_04625 CDS
T03728
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
hpyh
Helicobacter pylori oki828
Pathway
hpyh03420
Nucleotide excision repair
hpyh03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
hpyh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HPOKI828_04625
03430 Mismatch repair
HPOKI828_04625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
hpyh03400
]
HPOKI828_04625
Enzymes [BR:
hpyh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HPOKI828_04625
DNA repair and recombination proteins [BR:
hpyh03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HPOKI828_04625
MMR (mismatch excision repair)
Other MMR factors
HPOKI828_04625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_11
AAA_12
Viral_helicase1
AAA_30
ResIII
DEAD
DGKD_4H
Motif
Other DBs
NCBI-ProteinID:
AHN43550
LinkDB
All DBs
Position
922916..924946
Genome browser
AA seq
676 aa
AA seq
DB search
MLETLQLNPEQLKAAKALKGYNLVIASAGTGKTSTIVGRILYLLDNGIKPEEILLLTFTN
KASNEMIARVAKYSKSSSKIEAGTFHAVAYRYLKEHYPNLSLKQPKELKKLLESIVDTKN
ALTDDDKKPYTSQHLYALYSLYTNALKQEDFSAWLSHKNPEHTPYAAFYENILDEFENTK
KKHNYIDYNDLLLLFKKAMLERPSPYKEVLCDEFQDTNPLQESILDAINPPSLFCVGDYD
QSIYAFNGADISIISNFTQKYKNAQVFTLTKNYRSSKEILDLANQVIQHNERIYPKNLEV
VKSGHFNKPALLNYNDNIAQCQDIAKRIVMRKNFKEVAVIFRNNASADQLEAALRSHNVP
SKRKGSASFFESKEVALALDICALIFNPKDIMAAIHVLSCISDIGSNTAKDIHEALMLLG
NGDLKLALTHPSKEAKIYTKKKEITSMGLFEEIFALENSSRFNSVIDKAFHSHPVLMHPK
ISLNGAKMLSDFFILYTKAPTHSPSALIKHILESAFFQTFKTRLLKERSKNKDGSYNEFK
KLQAQKRFNEKMDLLSSLAKNYQNLGRFLNGTLIGSSEATQGEGVNLLSVHASKGLEFKD
VYIIDLMEGRFPNHKLMNTGGGIEEERRLFYVAITRAKENLWLSYAKNELRENAKPKEHK
PSVFLYEAGLLKPDLK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
ttgttagaaactttgcaattaaaccctgagcagctcaaagcggccaaggctttgaaaggg
tataatttagtgattgcgagcgctggcacgggaaagacttctacgattgtggggcgcatt
ttatacctgcttgataacggcatcaagcctgaagaaatcttgcttttgactttcaccaat
aaagcgagtaatgaaatgattgccagggtggctaaatattccaaatcaagctccaaaatt
gaagcgggcactttccatgcggtggcgtatcgctatttaaaagagcattaccccaattta
agcctgaagcaacccaaagaattaaaaaaacttttagaaagcattgtggataccaaaaac
gcgctaacagatgacgataaaaagccctacacttcgcagcatctctacgccctctattct
ctttacaccaacgctctaaaacaagaagattttagcgcatggctttctcataaaaaccct
gaacacacgccatacgccgccttttatgaaaacattttagacgaatttgaaaacactaaa
aaaaagcataactatattgactataacgacttactgctgttatttaaaaaagcgatgcta
gaaagacctagcccttataaagaagtgctttgcgatgaatttcaagacactaacccctta
caagaatccattttagacgctatcaaccctcccagtttgttttgcgtgggcgattacgat
cagagcatttacgcttttaatggagcggatatttctatcatttctaatttcactcaaaaa
tacaaaaacgcccaggttttcacgctcactaaaaactaccgctcttctaaagagatttta
gatctcgctaaccaagtgatacagcataatgagcgcatttaccctaaaaatttagaagtg
gtgaaatcagggcatttcaataaacctgcgcttttaaattacaacgacaatatcgcgcaa
tgccaagacatcgctaaacgcattgtcatgcgaaagaattttaaagaagtggcagtgatt
tttaggaataacgcgagcgcggatcaattagaagccgctttaagatcccacaatgtgcct
agcaaaagaaaagggagcgcgagcttttttgaatccaaagaagtggcgttagcgttagac
atttgcgcgctcatctttaaccctaaagacattatggcagcaatccatgttttaagctgt
atcagcgatattggttctaacactgctaaagacattcatgaggccttaatgcttttaggc
aatggtgatctcaaattggctttaacccacccaagcaaagaagccaaaatttacacgaag
aaaaaagaaatcacctctatggggctttttgaagaaatttttgccctagaaaacagctca
aggtttaatagcgtgatcgataaagcgtttcattcgcacccagtgttgatgcaccctaaa
atctcactcaatggggctaaaatgcttagcgattttttcattctttataccaaagccccc
actcattcccctagcgctttaatcaaacacattctagaaagcgcgttttttcaaaccttt
aaaacacgccttttaaaagaacgatccaaaaataaggacggctcttataacgaatttaaa
aaactccaagcgcaaaaacgcttcaatgaaaaaatggacttgctgagttctttggcgaaa
aattaccaaaatttagggcgttttttaaacggcactttaataggttctagtgaagccacg
caaggcgagggcgtgaatctattgagcgtgcatgcttctaaaggattagaatttaaagat
gtttatattatagatttaatggagggccgtttccctaaccacaagctcatgaataccggt
gggggcattgaagaagagcggcggcttttttatgtcgctatcacaagggctaaggaaaat
ttatggctttcttatgcaaaaaacgaattgagagaaaacgccaaacctaaagagcataaa
ccctcggtgtttttgtatgaagcggggcttttgaaacccgatttaaagtga
DBGET
integrated database retrieval system
